Rhagoletis zephyria (snowberry fruit fly): 108369368
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Entry
108369368 CDS
T08513
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 27C
KO
K14411
RNA-binding protein Musashi
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108369368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108369368
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108369368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
108369368
NCBI-ProteinID:
XP_017479986
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MEEDERGKLFVGGLSWETTQENLSRYFCRFGEIIDCVVMKNNESGRSRGFGFVTFADPAN
VSHVLQSGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYG
KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQ
SANNSNVSGGYGKLGNECNHWGPHHAPINMMQGQNGQMGGPPLNMPIGAPNMMPGYQGWG
TSPQQQGYGYGNSGPGSYQGWGAPPGPQGPPPQWSNYAAGPQQTQGYGGYDMYNSTSTGG
PSGPSGGGSWNSWNIPPNSAGPTGAPGAAAGSATDMYSRAQTWGAGGPSTTGPVGGMPRT
GPGNSASKSGSEYDYGGYGSGYDYDYSNYGKQDGGASNYGAGPRSAYGNDSATQPPYAAS
QAV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatgagaggggaaaactgtttgttggcggtctctcatgggagacgacacag
gaaaacctgtcacgttatttctgccgttttggagagatcattgattgtgtggtaatgaag
aacaacgagagtggtcgttctcgtggttttggctttgtaacatttgcggatccggcaaat
gtgagccatgtgctacagagtggaccgcatacacttgacggacgcacgattgatccaaaa
ccatgcaatcctcgtacgttgcaaaagcctaagaaaggaggcggttacaaagttttcctt
ggcggtttaccatccaatgttactgagacggatttgcgtactttctttggacgctatggc
aaagtaactgaagtagtcattatgtatgatcaagagaagaaaaaatctcgtggcttcggt
tttttgtcgtttgaggaggagtcgtcggtggagcatgtcactaatgaacgctacatcaat
cttaatggtaaacaggtggaaattaaaaaggcggaacctcgagatggatctggcggccaa
agcgctaacaatagcaacgttagcggcggttatggcaagcttggcaacgagtgcaaccac
tggggaccccatcatgcaccaatcaatatgatgcagggtcagaacggccaaatgggaggt
ccaccacttaatatgccaattggtgcccctaatatgatgcctggctaccagggctgggga
acttcacctcagcagcaaggctacgggtacggtaatagtggccctggttcttaccagggc
tggggtgctccacctggcccccaaggaccacctccacaatggtctaattatgctgctggt
cctcaacaaacccaaggttatggcggctacgatatgtataattcgacatcaactggtgga
ccatctggtccttcaggcggtggcagctggaattcatggaacatacccccgaattcggct
ggtccgacaggagcaccaggagctgctgccggaagcgctactgatatgtattcgcgcgct
caaacatggggagccggaggcccctcaactaccggccctgtaggcggcatgccacggact
ggtccgggtaactcggcatcaaaatcgggttcagaatatgactacggcggttatggctct
ggttatgactatgactatagcaactatggaaaacaagacggcggtgcctcgaattatggc
gccggaccgcggtcagcgtatggaaatgatagtgctacacagccaccatacgctgcctcg
caggcagtttaa
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