Rhagoletis zephyria (snowberry fruit fly): 108369508
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Entry
108369508 CDS
T08513
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108369508
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rze04147
]
108369508
Membrane trafficking [BR:
rze04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
108369508
Exosome [BR:
rze04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108369508
Exosomal proteins of bladder cancer cells
108369508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
108369508
NCBI-ProteinID:
XP_017480120
LinkDB
All DBs
Position
Unknown
AA seq
1234 aa
AA seq
DB search
MLTNFESKSARVKGLSFHPKRPWILASLHTGVIQLWDYRMHTLLEKFDEHDGPVRSVAFH
QQMPLFVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHEYPWILSSSDDQTIRIW
NWQSRNCICVLTGHNHYVMSAQFHPTEDQIVSASLDQTVRVWDISGLRKKNVAPGPGGLD
DHLKGHPGATDLFGQADAVVKHVLEGHDRGVNWASFHPTLPLIVSGADDRLVKLWRMNEY
KAWEVDTCRGHYNNVSCVLFHPRQDLILSNGEDRSIRVWDMTKRQCLYTFRRDGERFWIL
AAHPTLNLFAAGHDGGMVVFKLERERPAYAVHGNLLYYVKDRFLRKLDFTTTKDTVVMQL
RGGGKSPVHSMSYNPALNAVLICTRTNNLENSTYDLYQIPKDSESQNETESKRSSGITAI
WVARNRFAVLDRNQQLAIKNFKNEVTKKIPTFCEEIFYAGTGMLLIRDPEYVTLYEVQRL
VSVGCIKLAKCRYVVWSADMSLVALLCKHSVTICDRRLQYLCTIQENCRVKSGAWDDSGV
FIYTTSNHIKYAITNGDHGIIRTLDLPIYLTRVKGNQVFCLDRECRTRVLHIDSTEYKFK
LALINRKYDEVLHMVRNARLVGQSIIAYLQQKGYPEVALHFVKDEKTRFGLALECGNIEI
ALEAAKALDDKDCWDRLGQAALLQGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLKKMN
KIAEIRKDVSAQYQGALLLGDVKERVNILKNCGQLSLAYLTAATHGFQEQAGQLETTITQ
EGNELPVVNPNATLLQPPVPIQQVESNWPLLTVSKGFFEGAMITRAGTSATARQALNANA
DAAVLDDVGAGDGWGADADLGLGEDGDDEMHDALDSEPGAEGVGEEGAGWDVGDEDLVVP
EELASKIKASALDNGFYAAPSKGLSAPQHWANHSPLVVDHVKAGSFESAFRLLNDQLGVI
NFKPFKTLFLQNYTCARTSFTAMPNLQSLSAYPLRNTGETNPKNQRPALGVKLNDLVQRL
QAGYQLTTAGKFTEAIEKFHSILLHIPLLVVETKQDIAETQQLLKICSEYILGLKMETER
KGMPKSTLEEQKRLCEMAAYFTHCKLQPVHQILTLRTALNMFFKLKNYKTAASFARRLLE
LGPRPEVAQQVRKILQACEVNPIDEHQLQYEEFNPFNICGISYKPLYRGKPEVTCPFCGA
SFDTQYKGQLCTVCEVSQIGKDSIGLRISNLQFR
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaactttgaatcaaagtcagcacgtgttaaaggcttgtcttttcaccccaaa
cgaccatggattcttgccagtttacacactggcgtcatccaactatgggactaccgcatg
cacaccttgcttgaaaaattcgatgagcacgatggccctgtgcgaagtgtcgcattccat
caacaaatgccactgtttgtgtccggaggcgatgattataagattaaggtctggaattat
aaacaacgccgttgtatatttactctcttggctcatttggattacgtgcgcacggtggct
ttccatcatgagtacccatggattctcagctcctcagacgatcaaactattcgaatttgg
aactggcagtcccgtaattgtatttgtgtgctcactgggcataatcattatgtgatgagc
gcacagttccatccaacagaagatcaaatagtgtctgcttcgttggatcaaacagtgcga
gtttgggacatttctggactgcgtaaaaagaatgttgcgcctggacccggtggtttagat
gaccatttaaagggacatccgggcgctacagatcttttcggccaagccgatgctgtagtc
aaacatgttttggaaggtcacgatcgtggtgttaattgggccagtttccatcccactctg
ccacttattgtatcaggagcagatgatcgtcttgtaaaactatggcgtatgaatgaatac
aaagcttgggaagtggacacatgccgcggtcactacaacaacgtttcctgtgtgcttttc
catcctagacaagatttaattctttccaatggtgaagaccgtagcatacgggtttgggat
atgactaagcgccagtgcttatacacatttcgacgtgatggtgaacgtttctggatactt
gctgctcatccaaccttgaacttgtttgccgctggacacgatggcggtatggttgtattc
aaattagagcgcgaacgtccagcttatgccgtgcatggtaatttgctctattatgtaaag
gatcgttttctacgcaaacttgacttcacaactactaaagacacagttgtcatgcaatta
cgtggaggtggtaaatcgccagtgcacagcatgtcttataatccggcattaaatgcggta
ctcatttgcacgcgtactaacaatttagagaatagcacgtatgacttatatcaaattccc
aaagattctgaatcgcaaaatgagacggaatcaaaacgttcatccggtataaccgcaatc
tgggtggcccgtaatcgatttgctgtactcgaccgtaatcagcagttggcaataaagaac
ttcaaaaatgaggttactaaaaaaataccaaccttctgtgaggaaatcttttacgctggc
actggaatgctgttgatacgtgatccagaatatgtcaccctttatgaggtacagcgatta
gtatctgttggttgcatcaaattggccaagtgtcgttatgttgtttggtctgccgacatg
tcgctggtagcgttgctctgcaagcactcagttaccatttgcgatcgccgcctgcaatat
ttgtgcacaatccaggagaactgtcgcgtcaagtcaggtgcctgggatgactcgggtgtc
tttatttacaccaccagcaatcacattaaatacgctatcacaaacggtgaccacggtatt
atccgcacacttgacttgcccatttacttgactcgtgttaaaggcaatcaagtattttgc
ctggatcgggaatgtcgtacacgtgtactccatattgattcgacagaatataaatttaag
ctggctctaatcaatcgtaaatacgatgaagtattgcatatggtgcgtaatgcacgcctt
gtgggccagagtatcattgcctatctgcaacaaaaaggatatcctgaagtggcgctacat
tttgtcaaggacgagaaaacgcgattcggtttggccttagaatgtggaaatatcgaaatt
gcattagaagcagctaaggcactcgatgataaggactgttgggatcgactagggcaagcc
gcattgctacagggtaatcatcaagtggtcgagatgtgctaccaacgcaccaaaaacttt
gacaagctcagttttctatatttaataactggcaatctcgaaaaacttaagaagatgaat
aagattgcagaaattcgcaaagatgtttcagcccagtaccagggtgccctgctgttgggt
gatgtcaaggaacgcgtaaacattcttaaaaactgcggccaactttcgctggcctatctt
accgctgcgacgcatggttttcaagaacaagcaggtcaattagagacaacgatcacccag
gaaggtaatgagttgcccgtggtcaatccaaatgcaacgttgctccagccacctgtacct
attcagcaagtggaaagtaactggccactactgaccgtgtcgaagggcttctttgaaggt
gccatgattacacgtgcaggcactagtgccactgcacggcaagcgcttaacgccaatgcc
gatgcagctgtgttggatgatgtcggcgcaggtgacggttggggtgcagatgcagacttg
ggtctcggagaagacggtgacgatgaaatgcatgacgctctcgatagcgaacctggtgca
gaaggtgttggtgaggagggcgctggctgggatgtaggtgatgaagatttggtagtgcca
gaagaacttgcctcgaaaattaaagcttctgctttggataatggcttttatgctgcacca
agcaaagggctctctgctccccagcactgggctaatcattcgcctcttgtagtagatcat
gttaaagctggctcctttgaatcggcattccggctactcaacgatcaattgggtgttatt
aatttcaagccttttaaaacattatttttgcagaattacacttgtgcacgcacaagtttt
acagctatgcccaatttgcagtcactgtccgcatacccgcttcgcaacaccggcgaaacc
aatccgaaaaatcaacgcccggcattgggtgtaaaattaaacgatttagtgcaacggttg
caagccggctaccagctcaccacagctggtaaatttacagaagctatcgaaaaattccat
tccattttgttacacataccactgttggtggtggagacaaagcaggatatcgcagaaaca
cagcaattgttgaagatctgttccgaatacatacttggcttgaaaatggaaaccgaacgg
aagggtatgccaaagtctacgttagaggagcaaaagcgcctctgtgaaatggccgcctat
ttcacgcattgcaaactacagcctgtccatcagatccttacgttacgcacagctttgaat
atgttctttaaactgaagaactataagacggctgcatctttcgcccgacgactacttgag
ttgggtccacgaccagaagtcgcacaacaagtacgcaaaatcttgcaggcctgtgaagtt
aatcccatagacgagcaccaattgcagtatgaagagttcaatccatttaacatttgtggt
ataagctataagccgttataccgcggtaaaccagaggtgacgtgcccattctgtggtgcc
tctttcgatacgcaatacaagggacagctttgcaccgtctgtgaagtgagtcaaattggc
aaggacagtattgggttgcgcatatcgaatttgcaatttcgctaa
DBGET
integrated database retrieval system
