Rhagoletis zephyria (snowberry fruit fly): 108369644
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Entry
108369644 CDS
T08513
Name
(RefSeq) nuclear pore complex protein Nup160 homolog isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108369644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108369644
03036 Chromosome and associated proteins [BR:
rze03036
]
108369644
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108369644
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108369644
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_Nup120_160
TPR_NUP160_120_M
NUP160_helical
TPR_Nup160_C
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
108369644
NCBI-ProteinID:
XP_017480292
LinkDB
All DBs
Position
Unknown
AA seq
1451 aa
AA seq
DB search
MDAGCLFYREVLPDTSCQEEWTEIQLNTGATQSTLQDIKVAEKAGGYCFQNVRLNHNRNR
FIYWRTYQDVLELSEVCLDFTLYKNNVRYKFSDTPVLNVCISEQDGYVTLLVTTVCSLHH
LKFPHPDTLAEGSGNKIGAQNGSSNLSSKNGGISIDFNESQTFSIFHEANNSSVRDPSSF
YVIDSQNAASSPAPHAATSFLSPSGGDAYFALACQSELMLFVMNCETGDTTSQSLKENNI
MPRLFSNLKNAFTGKNDFSDANYANSVVFSYINGQIYLLALYRDDQLRVWSTTNFQCACS
IDCVRDNNRTRIQGPQSSALRKISNTSFCAFLSHATRSEFVCINIHPETGTSSGLSISYR
KSIPAPALDLADFAVCENRIWALWTNAEGEFSISNYPLLRGLGMNWSSVALEPPPDRYCV
VNEHGMDPREAYCNYIFQRGIFEREVIAKALFMFRRTNLRFESKHCTLPILKDQVCQAVE
DEIQNEVKEFDVTDEDYLEIATRQWERFYSCCEQYHLKSCQPCGFFLLEPIDGLCVVKKN
TFSLLRPCETLEHFMLVSDDLDVNTAVSTYFAGNERVGEDLVILVSIVAQLERWLPDETK
GEIDKRLYRLEMPNVFIAKLSDEILAGDPDRELFPSTFLVWIRQKIQSINDMGMAMTLLL
ESLRMDNGNPAGMQTNLGIVQSSQYLSTVGVLFGSHLGLSVLSETVRQITAIKFSICRNL
LIMQQILIDTYSLGVDLLEKMRSHFMPDTTIFLQSYFVMGWIAETPVNIAAAASLESSIQ
RLNLLQLTNGSGRIYSNGGKYHVSPLVRVFLNAKGLYASMALYADNFKNSENIPTLSNTL
LPLTTIVSQLIWPVSFNFVFGEWLFGTCQHIVIQNYVRLLSNWCEWNICSRQFILAVSLL
DSGESFKAYDLFLQSAKGVLREQFLTDKILKGTPLAQRAEYLSTIGENDGGDALDTNVNN
QVITQYYLKVIQLLEQHNALDHIISMAQVAIGLLGKSDSQLPMFQSIVFNNHLQLEHYEE
AYHSLIYNAELSRRKDCLRQLVVTLFNRKRLDLLMHFPYVGLHEEFENIVESRARSLVID
QNEVYDFLYAFHVNNGNMRKASAIMYEQAMRFQLEGDSIESMEKRCASLLVCINSLHLID
RRYRWIAKPVIGLDDAQPLSALNDSEPMDTKPDDDAIREQVVVLEIKDIKRELLHTEALM
RLADHRKDIQTFIHAGPQELAIILSGCGLYTAALKLVNGFEISTLSIFESLTAACVRVSE
ESANEAWAWLQENDLADLPHRNKAADMAWSFLQKLIYDNELENATRIRKSVVNKLLSLNA
FVPQWLYNEYKMANCTELLYLFVKHNRLIEAAELAQEMISAMLGAGSEYFSFKHAIAVTN
QEMCLPVNTLDLLLHGLRLNADSDIEYKQVLSDLEDIIQIYIDTAQRTADDKIQMAFQEQ
RSHQRQQVFMA
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggatgctggatgtttattttatcgtgaggttttacctgacacttcgtgtcaagaggag
tggactgaaattcagttaaatactggtgcaacgcagagtacattacaggacataaaagtt
gcggaaaaagctggaggatattgttttcaaaacgtgcgattgaaccacaatcgcaatcgt
ttcatttattggcgcacttatcaagatgtactggaactgtccgaagtttgtttggacttc
actttgtacaaaaacaatgttcgctacaagttttctgacactccagttctaaatgtttgt
ataagtgagcaagatggctatgtcacgcttcttgtgacgacggtttgcagtctccaccat
ctaaagtttccacatcccgatacgttggctgaaggtagtggcaataaaataggcgcacag
aatggatcaagcaatttgtcatcaaaaaatggtggaatttctatagactttaatgagtcg
caaacattttccatttttcatgaagctaataactcgtctgtgcgcgatccaagcagtttc
tatgtcattgattcacagaatgcagcctcaagtccagcgcctcacgcagctaccagcttt
ttatcaccgagtggtggtgatgcctactttgcattagcttgtcaatcagaactaatgttg
ttcgtaatgaattgcgagactggtgataccacttctcagtcattaaaggagaacaatata
atgcctcggctattctcgaatttgaaaaacgctttcaccggcaaaaacgatttttcggat
gccaactatgcaaattcggttgtatttagttacatcaatggtcagatatacttacttgca
ttatatcgtgacgatcaattgcgtgtgtggtcaacaacgaattttcaatgtgcttgttct
atcgattgtgtacgcgacaataacagaactcgtatacaaggacctcaaagcagcgcatta
cgtaaaataagcaacacatcattctgtgcttttctatcgcacgctaccagatcagaattt
gtttgcattaacatacatcctgaaactggcacttcatctggattgagcataagttatcgt
aaaagcatacctgcaccagcactggatttagctgattttgcagtgtgtgaaaatagaatc
tgggcattgtggacaaatgccgaaggtgaatttagcatatcgaattatccgctattgcgc
ggcttgggtatgaattggtcatcggtagcactggaaccgccaccggatcgatactgcgtt
gtaaatgaacatggcatggaccctcgtgaagcctattgtaattatatcttccaacggggc
atattcgaacgtgaagttattgcgaaggccctatttatgtttcggcgcacaaatttacgt
tttgaatccaagcactgtacactacctatactaaaggatcaggtgtgtcaagcagttgag
gatgaaatacagaatgaagtcaaagaattcgatgtcactgatgaggattatttggaaata
gctactcgacaatgggaacgcttctattcttgttgcgaacaatatcatttaaaatcttgc
caaccctgtggattctttctactcgaaccaattgatggtctgtgtgtggtgaagaagaac
actttttcccttttgcgcccatgtgaaacattagaacattttatgctggtcagcgatgat
cttgacgtgaatacagctgtttccacatatttcgctgggaatgagagggtgggtgaggac
cttgttattttagtttccattgtcgctcagcttgagcgttggctgccggatgaaaccaaa
ggagaaatagataaacgtctgtatcggctagaaatgccaaatgtattcatcgcaaaattg
agtgacgaaattttagcaggtgatcctgatcgagaattatttcctagcacctttttggtg
tggataaggcagaaaatacagtcaattaatgatatgggaatggcaatgacgctattactt
gaaagtcttcgaatggataatggcaatccagctggaatgcaaacgaatttaggtatagtg
cagtcttcacaatatctatctacggttggtgttcttttcggtagtcatttgggtttgtca
gtactgtcggaaactgtgcgtcagataactgcaataaaattttcaatatgccgcaattta
ctcattatgcagcagattcttattgacacttactctcttggtgtagatttgttagaaaaa
atgcgctctcatttcatgcctgatacaacgattttcttgcaatcctactttgtaatgggt
tggatagcagagacgcctgtgaacatagccgcagctgcatctttggagagttcaatacaa
cgcttgaacctcttacaattgactaatggttcagggcgtatttactcgaatggtggaaaa
tatcatgtatctcctttggtgcgagtcttcttaaacgcaaaaggactgtatgcctccatg
gcactttacgctgacaattttaagaatagtgaaaatatccccactttgtcgaatacccta
ctgcctcttactaccatcgtcagtcaattgatctggccagtctcttttaattttgtattt
ggtgaatggttatttggaacctgccaacacatagttattcagaattatgtgcgtttgctt
agcaattggtgtgaatggaatatttgttcacgacaatttattttggctgtttccttgctt
gacagtggggaatcatttaaagcctatgaccttttcctccagtcagcaaaaggtgtacta
cgcgaacaattcttaacagacaaaattcttaagggtactccactggctcaacgtgcagaa
tatctatctactatcggagaaaatgacggtggtgacgcgttagatactaacgtcaataac
caagtcattacacaatattatttgaaagtgattcaattgcttgaacagcataacgcgttg
gaccacattatttctatggcacaagtagccattgggttactgggaaaatctgactctcaa
ttgccgatgtttcaatctatcgttttcaataatcatctgcagttagaacactacgaggag
gcctaccactcgctcatctataatgcggagctatcacgtcgcaaagattgccttcgtcag
ctagttgtgacattatttaaccgtaaaagactcgacttactcatgcattttccctatgtt
gggttacacgaggaattcgaaaatattgtggaatcgcgtgcacggtcactagtaatcgat
cagaatgaggtatatgattttctatatgcatttcatgtcaacaacggaaatatgagaaaa
gcttctgccataatgtatgagcaggcaatgcgtttccagcttgaaggcgattctatcgaa
tctatggaaaaacgttgcgcttcccttttagtttgtatcaactctctgcatctaattgat
aggcgatatcgttggatagcgaaaccagtgattggattagatgacgcacaaccattgagc
gcgttaaatgattcagagccgatggatactaaaccagatgatgatgccatacgtgaacaa
gttgtagttttagaaataaaagatataaaacgtgaattattgcatacggaagcactgatg
cgactcgcagatcatcgcaaagacatacaaacttttatccatgcaggtccacaagaattg
gcgattattttatctggctgtggactctatactgctgcacttaagctcgtcaatggcttc
gaaatatcaactctttccatattcgaaagtctaactgcagcgtgtgtacgcgtttctgag
gaaagcgctaatgaggcatgggcgtggttacaggaaaatgacttggctgatttacctcat
cgcaataaagctgctgatatggcctggtcatttttacaaaaacttatttatgacaatgag
ttggaaaatgcaacacgcatacgcaaatctgtggtgaacaaactgcttagcctcaacgct
tttgtgccgcaatggttatacaatgaatataagatggctaattgcaccgagttgttgtat
ttgtttgtcaaacataatcggttgattgaggctgccgaattagcacaggaaatgatcagc
gcaatgttaggtgctggaagcgaatattttagttttaaacatgcaattgctgttaccaat
caagagatgtgtctgccagtgaatacattagatctcttgttgcatggattaagattaaac
gctgattcagatattgagtacaaacaggtgctcagcgatttagaagacatcatacagatc
tatattgatacggcacagcgcacagcggatgataaaatacaaatggcattccaggaacaa
cggtcacaccagcgccaacaagtattcatggcatga
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