KEGG   Rhagoletis zephyria (snowberry fruit fly): 108369645
Entry
108369645         CDS       T08513                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03030  DNA replication
rze03410  Base excision repair
rze03420  Nucleotide excision repair
rze03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108369645
   03410 Base excision repair
    108369645
   03420 Nucleotide excision repair
    108369645
   03430 Mismatch repair
    108369645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rze03032]
    108369645
   03036 Chromosome and associated proteins [BR:rze03036]
    108369645
   03400 DNA repair and recombination proteins [BR:rze03400]
    108369645
DNA replication proteins [BR:rze03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    108369645
  DNA Replication Termination Factors
   ELG1-RFC complex
    108369645
Chromosome and associated proteins [BR:rze03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    108369645
DNA repair and recombination proteins [BR:rze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     108369645
  Check point factors
   HRAD17(Rad24)-RFC complex
    108369645
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rep_fac_C Rad17 AAA AAA_11 AAA_22
Other DBs
NCBI-GeneID: 108369645
NCBI-ProteinID: XP_017480295
LinkDB
Position
Unknown
AA seq 356 aa
MALWVDKHRPRELAKLDYHKEQAENLRNLCQQGDFPHLMFYGPSGAGKKTRIMGLLRELY
GAGVERLRNETMTFTTPSNRKVEVMTVGSNYHLEVNPSDAGIYDRVVVIDLIKQVAQTHQ
IDASGQREFKVIVLSEVDELTKDAQHALRRTMEKYVATCRIILSVNSTSRVIPAIRSRCL
GIRVPAPSEEEINTVLQQTCKREGLTLPTDLATRIVEKSEHNLRRALLMLEACKVQQYPF
TGQQDIVELDWQVFLRETANQIVTEQTPAKLEKIRDRLYELLAQGVPPDMIFRGLVEQLV
KNCDMSLKAKTLEYAALYEHRMQNGAKHIFHLEAFVAQFMNIYKKFMSESMMMDDF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atggctctctgggtggataagcataggccacgtgagttggccaaacttgattatcacaaa
gagcaagctgaaaatttgcgcaatctgtgccagcagggtgattttccacatttaatgttc
tatggcccctctggtgctggtaaaaaaactcgtattatgggtttattgcgcgaattgtac
ggcgctggtgtggaaagactgcgtaacgaaacaatgacctttaccactccatcgaatcgc
aaagtagaagtgatgacagttggaagtaattatcatttagaagtaaatccttcagatgcg
ggcatttacgatcgtgttgttgttattgaccttatcaaacaagtggctcaaacacatcaa
atcgatgcatcagggcagcgtgaatttaaagtaattgtactttctgaagtggatgagctc
actaaagacgctcagcatgcgctgcgtcgcactatggaaaagtatgtggctacatgtagg
attatattgtcagtgaattctacgtcgcgcgttataccggctatacgatctcgttgctta
ggaatacgtgttcctgcacctagcgaagaagaaataaacacagtactacaacaaacatgc
aagcgtgaaggattaaccttgcctactgacttggccacacgaatcgtggagaaaagtgag
cataatttacgtcgcgccttgttgatgttggaagcttgtaaggttcagcagtaccccttc
accggacagcaggacatcgttgaactagactggcaagtatttttacgtgagacagccaac
caaattgtgacagagcaaacaccagcaaagctagagaagatacgtgaccggttgtacgaa
ttgctggcacaaggggtgccccccgatatgattttccgcggattagtagagcaacttgtt
aaaaactgtgacatgtctctcaaagcaaaaacattggagtatgcagcactctatgaacat
cgtatgcagaacggcgctaaacatatattccacttggaagcgttcgttgctcaatttatg
aatatatacaaaaaatttatgtccgagtctatgatgatggacgatttttaa

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