Rhagoletis zephyria (snowberry fruit fly): 108369656
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Entry
108369656 CDS
T08513
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108369656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rze04121
]
108369656
Enzymes [BR:
rze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108369656
Ubiquitin system [BR:
rze04121
]
Ubiquitin ligases (E3)
HECT type E3
108369656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
WWE_1
Motif
Other DBs
NCBI-GeneID:
108369656
NCBI-ProteinID:
XP_017480307
LinkDB
All DBs
Position
Unknown
AA seq
1811 aa
AA seq
DB search
MKSRGGDEVPENSATRRSKRTVNNNTIENSSQIQPKKPKVDTNTVQAKKPKPKASTSQDP
IASSSSSTLASSSSSFLSQKTLAPNKKQKKETEEKKTGSSLGTSKNLATSKSSKASSKQL
TKSASLEENSEARQAKSLVMDQNGANSSNNNTTSSSAANPNTSGTSSNVPTSSSDIATTG
SAANPTGGPGNLLASSNNSTFAVSAQLDAESDDSDMSRLQTILESRGLHPHFLGLPRMQN
FFYRSLNSTSNSKAQQLLQALNSTTNDAEKLNYVLEMCQLLLMGNEDTLVGFPIKTVVPT
LINLLSMEHNFEIMHHACRALTYMMEALPRSSVVVLDAVPVFLEKLQVIQCMDVAEQSLS
ALEMLSRRHNKAILQARGVSACLTYLDFFSIDAQRSALTITANCFQNITTDDFQYVQDSL
PILSSHLSIEDKKCIESICLAFSRLVDCYQQDCAIISEIASSELLTNIQSVLMTVPPILS
TGSFVNVIRMLSIMCSSCSQISVELLKLDICSTLKCLLLCNNSAVESGNAINLISRSPQE
IYELTAFIAELMPSLPSDGIFAVDQLFTKANQGLAEVAQWQWKDDRGLWHPFNVVDNKII
ESAHHAGEDELELASLNRTYIIDFNSMQKIYEDTGNSYAIQRKVNTLSNSELASRPGLSN
VQNVDPRSEFIYNEQELSCSYLMFIFSVLNEVYNNSAGFSVRYKCLNAILRIIYHTPKDL
LYSILKDQSMSSSIATMLASSDIRIVVCATQISDDILKRKRTKKNFGLSSGTRSSSLNSG
FDHTPIISPAAENGGGNVEQQSSSSSVAVNPPVAADVAQSYVNFPLFISNDQVNNANLTI
PNASNNNNAVSNGGSSKGGSTRLTSKDFLQRLNPSRWTRWTQNSLAQNTTNTTSAPTTST
TTPSAKNPPLQQKSSHLNKEKIKAWIKSQAKLFDDKYFLKVDKETKTQSVSCNVLDDLTE
SINSLGTDVTKALLTIKQILLETDLSSFELIHSGLVKNLLSFLVGADCSEDVRDQNLRSF
LNIFYGAPLNDIIESIDEQKFDPKPLSILINKLNACVSQLEQFPLRVHDYANSRGGSHAK
FLSSHHIKVSLSRHSSCSNIKKYKGPLIKLDPFTPVQSIERFLLARGYGKIKDVDDDQSD
DDISDEDLIDNITNFGSASQAQGRHRLQLLINDQVLPYNYSIFQAIKQFMISDHPDTDSD
DPQVGAAKNMSNHTFNIQYRLATESAPVASANASSTSSSSSNKSSRKTKSSKSATKKKDE
IWLEGKTAKAISPLESYLKSSLSFTTPINDQSIEVLCLLRVLFGINRYWGYLYKVPHSYN
PAIPLKEFINYKLTVKANRQLQDPVVIMAESLPNWLSEIANACPFIFPFDTRYLLFYVVC
FDRERALQRLLENTPDFSSLDSRERSIVPRLEKRKRIVSRADIFKSAEALFNDLSGSKSL
LEIQYENEVGTGLGPTLEFYALVSKEFQRSDFEMWRGEVLANCEFKQEKNDANPVNYVFS
SNGLFPAPLGRSTKPAVVNKLKQRFKLLGKFMAKALMDSRMIDIPLNILFYKWLLNEQPT
MNVADIQQLDPTFSTSIFQMYKILLRKSKMNLNNNDDSLKLHGCSIDDLNLDFTLPGYSS
IEMRKGGRDMLVTVLNLDNYINLVTSWLLIEGVLKQMEAFKEGFNSVFNSSHLRLFYPEE
MQQLFCGASYNRWDVKMLMESCKTDHGFSHDSKAIHNLFEILSSYNAEEQRKFLQFLTGS
PRLPIGGFKSLIPPFTIVRKTNTTESDNPNCLPSVMTCVNYLKLPDYPTIEIMREKLKIA
INEGQFSFHLS
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcccgtggtggagacgaggtccctgagaatagtgccactcgtcgctcgaaacgc
actgtcaacaacaacaccattgagaatagtagtcaaattcagccgaaaaagcccaaggtg
gacacaaacacagttcaagcaaagaaacctaagcctaaagctagcacttcacaggatccg
attgcatcatcatcatcatcaacattagcatcatcatcgtcatcgttcttatctcagaaa
actctagctccaaacaaaaagcagaaaaaagagacagaagaaaaaaagacgggttcatct
cttgggactagcaagaacttggcaacttctaaatcttcaaaagctagttccaagcagtta
accaagtctgcttctcttgaagaaaacagcgaagctaggcaggccaagtcactggtgatg
gatcaaaatggagccaactcatcgaacaacaatactaccagctcttcggccgctaacccc
aacacctctggtactagcagcaatgttcccacatcctccagtgatattgccaccactggt
agtgcagctaaccctactggtggaccgggcaatttgttagctagcagtaacaacagcact
ttcgctgtcagcgcccagctggatgccgagtcggacgatagcgacatgagtcgacttcag
actattctcgagtctcgtggtttacatcctcactttctaggtctgcctagaatgcaaaat
tttttctatcgttcgctgaacagtacgtcaaactcgaaagcccagcaacttctgcaagcc
ttgaactcgactaccaatgatgctgaaaagctcaactacgttctcgagatgtgccagctc
ttgctcatgggcaatgaagacactttggttggctttccaatcaaaacggtagttcccact
ctaattaatttactctcaatggaacacaatttcgaaataatgcatcatgcctgccgtgcg
ctgacctacatgatggaagcccttccgcgctcctctgttgtcgtactggatgctgttccc
gtctttctagagaagcttcaagttattcagtgcatggacgttgccgagcagtctttgtct
gcgcttgaaatgctgtctcgccgccacaacaaggccattcttcaggctcgaggtgtgtct
gcctgtctcacttacctggactttttctccattgacgcccagcgctcagctctcactatc
acggccaattgctttcaaaatatcaccacagatgactttcagtatgtgcaggactctctg
ccaattctcagctctcacctctcaatcgaagacaaaaagtgcatcgaaagtatttgcctg
gccttttcacgtcttgtagactgctaccagcaggactgtgccatcatcagcgaaatcgcc
tcatcagaattgctgacaaacattcaaagtgtgctaatgaccgtaccgcccattcttagc
actggctcctttgtcaacgtcattcgaatgctctccatcatgtgcagcagttgctcacag
atatcagtagagctactgaaacttgacatttgttcaactctcaagtgtttgctactctgc
aacaatagcgctgtagagagtggcaatgctattaatctcatttctcggagtcctcaagag
atatatgaactaactgcctttattgctgaactgatgccaagcttgccgtcagatggaatt
tttgccgttgaccagttgttcaccaaggctaatcaaggtttagccgaagtcgctcagtgg
cagtggaaggatgatcgtggtctctggcatcctttcaatgtggtcgacaataagatcatt
gaatcagctcaccacgccggagaggatgagcttgagttggccagcttaaatcgcacatac
ataatcgatttcaactcgatgcagaaaatttacgaagatactggaaactcgtatgctatt
cagcgaaaggttaatactttgagcaattctgagctagcctctcgtcctggcctttcaaat
gtgcaaaatgttgatcctcgttcggagtttatctacaatgagcaagagttgtcatgttca
tacttgatgttcattttcagtgttctcaatgaggtgtacaacaattcagcaggattttcc
gttcgctacaagtgcctgaatgccattctacgaatcatctaccacacaccaaaagatctt
ctgtactcgattttgaaggatcagtctatgtccagttctatagctacaatgctcgcctct
tcggacattcgaattgtcgtctgcgctactcaaataagtgacgacattttaaagcgaaag
cgaaccaagaaaaactttggcctttccagtggcactcgctcaagctctttgaacagtggc
tttgatcatacgccaatcattagtccggccgcagaaaatggagggggcaatgtggaacaa
cagagctccagttcttcggttgctgttaaccccccagttgcagcagatgttgcccaatcg
tatgtcaattttccacttttcatctctaatgatcaagtgaataatgctaatttgactata
cctaacgccagcaacaataacaacgccgtcagcaatggtggcagcagcaaaggtggcagt
acaaggctgacttcaaaagattttcttcagcgtctcaatccttccagatggactcgttgg
acgcaaaattctttagcgcaaaataccaccaacacgactagtgctcccactacgtctact
acaacgcccagtgcaaaaaatccgccgttgcagcaaaaatcctcacacctgaacaaggaa
aagatcaaagcgtggattaaatcgcaggccaagttgtttgacgacaagtacttcttgaaa
gtggacaaagaaacgaaaactcagagtgtgtcttgcaacgtgctagacgacctgaccgag
tccatcaactcacttggaactgacgtgactaaagcactattgaccattaagcaaatctta
cttgaaactgacttgtcttcttttgagctgattcatagtgggcttgtaaaaaatctgctc
agtttcctcgtcggggctgattgctcagaagatgttcgtgatcaaaatttgcgctccttt
ctgaacatcttttacggtgctccgttgaacgacatcatcgaaagcattgatgagcaaaag
tttgatcccaagccactctcaattttaatcaacaagctcaacgcttgcgtatctcagctt
gaacagtttccacttcgagtgcacgactatgccaacagtcgaggcggctcacatgccaag
tttttaagcagtcaccacatcaaagtcagtctgagccgtcattcgtcttgtagcaatata
aaaaagtacaagggtcctctaatcaagctcgacccattcactcctgtgcaatcaattgag
cgctttctcttggcccgtggttacggaaaaatcaaagatgtcgatgatgaccaaagcgat
gatgacatttcggatgaggatttaatcgacaatatcaccaactttggatctgctagtcaa
gctcaaggaagacatcgtcttcaactgctcattaacgaccaggtgctaccgtacaactac
tcgatctttcaagccatcaagcagttcatgatcagtgatcacccggacactgattcggac
gaccctcaggtgggcgctgcaaagaacatgtcaaaccacacatttaatattcaataccga
ttggcgactgagagcgctccggtcgccagtgcaaatgcatcctctactagtagctcctct
tcaaacaagtcatctcgaaagactaagagctccaaatcggccaccaagaagaaggatgaa
atttggttagaaggaaagacggccaaggccatatcacctcttgaatcatatctcaaaagt
agtctttcatttaccactccaattaacgatcagtcaattgaggttctctgcctcttgcga
gtcctcttcggaattaatcgctactggggctatctctacaaggtgccacattcgtataac
ccagctattccgctgaaggagttcatcaactacaagctcaccgtgaaggccaatcgtcag
cttcaggatccagtggtcatcatggccgaatctctacccaactggctttcagagattgcc
aacgcctgtccattcatctttcccttcgacacacgttatttgctcttttacgttgtctgc
tttgatcgtgaacgtgcccttcagcgtttgctagaaaacacacccgacttttcgtcactt
gattctcgtgaacgctccattgtgcctcgtctcgagaaaagaaagcgaatcgtttcgcgg
gctgatatcttcaaaagtgccgaagccctcttcaacgatcttagcggctcgaagtctctc
ttggaaattcaatatgaaaatgaagtcggtacaggacttggtccgactctcgagttttat
gctcttgtttcaaaggagtttcagcgctcagactttgaaatgtggcgtggggaagtgctg
gccaactgcgaattcaagcaggagaaaaatgatgccaatccagtcaactacgtattctcc
agcaatggcctctttccagcgcctctaggtagaagtaccaagcctgctgtggtgaacaag
cttaagcagcgtttcaagctgcttggcaagtttatggccaaagctctcatggattcaaga
atgattgatattccattgaacattttgttttacaagtggcttctcaacgaacagccaacc
atgaatgtcgcagatattcagcagctggatcctacattttctacatctatttttcaaatg
tacaaaattctattgcgtaaatctaaaatgaacctgaacaataatgacgattcgctgaag
ctgcatggctgttctattgacgatttgaatttggatttcactcttccgggctattctagt
attgagatgcgaaaagggggtcgtgacatgttggtgactgttttgaatctcgacaactac
atcaacctggtcactagctggctgctgattgaaggtgtgctgaagcaaatggaagcattc
aaggaaggcttcaactctgtcttcaactcgtcacaccttcgactgttttatcccgaggaa
atgcagcagcttttctgtggtgccagctacaatcgttgggacgtcaaaatgctgatggag
tcctgcaaaaccgaccacgggttttcgcacgacagcaaggcgattcacaatctctttgaa
attctaagctcttacaacgccgaggaacagcgtaagtttttgcagtttttgaccggctca
cctcgtcttcccatcggcggcttcaaaagtctaattccaccgttcaccattgtgcgcaag
acaaacaccaccgagagcgacaatcccaactgtctgccaagtgtgatgacatgcgtcaac
tacctgaagcttcccgactacccaaccattgaaataatgcgcgaaaagcttaaaatcgcc
attaatgaaggccaattttcgtttcacctctcgtaa
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integrated database retrieval system
