Rhagoletis zephyria (snowberry fruit fly): 108369744
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Entry
108369744 CDS
T08513
Name
(RefSeq) LIM domain-containing protein jub
KO
K16682
LIM domain-containing protein
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04391
Hippo signaling pathway - fly
rze04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09130 Environmental Information Processing
09132 Signal transduction
04391 Hippo signaling pathway - fly
108369744
04392 Hippo signaling pathway - multiple species
108369744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108369744
03036 Chromosome and associated proteins [BR:
rze03036
]
108369744
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108369744
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
108369744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
108369744
NCBI-ProteinID:
XP_017480417
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MASQRRNENLSEAMQRLQMGDEKIGLSSPKHPIVANYIRQHIGNTPAQQQQTAEEYKLYE
RTNIIASSKYATPRAIEQLSGDASTSIVPLSQPASNGNIAGVGNSPHYAGRNIMYEQKSS
KHSPVYENLEFCGVGAAVSPAPYFDSAHKRAQPQSPTANPSRGQYMVMHASTNSGRFAHT
PVPDHHTDNSPIYENIIPHSGQRAQPQASPATATIYQHVEISPQIGVVGSGGAMPLAPHH
IRENSGLDMTAVLASPMHRRSTSNSSLKTATSNSTAAATGGGSGLSSPTQRYRNLSLPSS
TNNVQISPTKSMASSTASGNDYKLLQHTPIKNTHHFPTHHPIINVSVNPNYIEEINSSDY
VCMTANLHRQPARSPTGGVASLRSNTTAIALSSSGHRKMCNESPIYVGSSGAIETEKSAS
LAGARKISPMSERKFTQSPLAIPQRPITSGGGVASSISPTPSQNSTGLSKNLLPYSVTPP
RPIGPTEAQRKIEELTRQLEEEIEQSEEQGEYFGICHTCGDKVKGAGQACQAMGNLYHTN
CFICCSCGRALRGKAFYNVHGRVYCEEDYMYSGFQQTAEKCAICGHLIMEMILQAMGKSY
HPGCFRCCICNECLDGVPFTVDVDHKIYCVNDYHRMFAPKCASCGKGITPVEGTDETVRV
VSMDKDFHVDCYICEECGMQLTDEPDKRCYPLDGRLLCRSCHLQRLAMQQSSPHVRHQEP
VCASYQYMG
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggctagtcaacgccgcaatgaaaaccttagcgaagcaatgcaacgccttcaaatgggc
gatgagaaaattggacttagttctccgaaacatcccattgtagcgaattacatacggcaa
catataggtaatacccctgcacagcagcaacaaactgccgaggagtataagttgtatgaa
cgtacgaatatcattgcttcttctaagtatgccacaccccgtgcgattgaacagttgtcc
ggagatgcaagcacaagcattgttccactttcacaacctgcatccaatgggaatattgca
ggtgtgggtaatagtccacattatgctggtcgtaatataatgtatgaacaaaaatcatcg
aagcattcgcctgtttatgaaaatctagaattttgtggcgtcggcgcagctgtctcgcct
gctccatactttgattcggcacacaagagagcacaaccccaaagccctactgcgaatcct
tcacgcggtcaatatatggtgatgcatgccagtaccaatagtgggcgatttgcccataca
ccagtaccagatcatcatacggacaattcgccaatttacgaaaatattataccacattct
ggacagcgtgcacaaccgcaggcttcgcctgcaactgctactatttatcaacacgtcgag
atatcaccacaaattggcgttgttggtagtggtggtgccatgccgctagcaccgcatcac
attcgtgaaaactcgggtctagatatgaccgcggtgttagcctcaccaatgcatcgacgg
agcacctcgaattcctcactgaaaacagcaacgtccaatagcactgcggccgctactggg
ggtggcagcggtttatcatcgccaacccagcgttaccgcaatctatcattacccagtagt
actaacaacgtacaaatatcgccaactaaatcaatggcatccagtacagcgagcggtaac
gattacaaactattgcaacacactccaattaaaaatacacatcactttcccacacatcat
ccgatcatcaacgtatcggtaaatccaaactacattgaggaaatcaacagttctgattac
gtgtgcatgacggctaatttgcatcgccagccagcgagaagcccaactggaggcgtagca
tcactacgttcaaatactacggcgattgctttgagcagcagtggacaccgaaaaatgtgc
aatgaatcgcctatttatgtaggcagtagtggtgcaattgagacagaaaagtctgcctcg
ttagctggtgcacgtaaaatttcgcctatgagcgaacgtaaattcacgcaatcaccactg
gctatacctcagcgcccaataacatccggtggtggggttgcatcgtccatatcaccgacg
ccctctcaaaatagtactggcctctcaaagaatttactaccgtatagcgtgacaccgccc
cgtcccatcggtcctactgaagcccaacgtaaaatcgaagaactcactcgccaattagag
gaagaaatcgaacaaagcgaagaacagggagagtattttggaatttgtcatacgtgtggc
gataaggtaaaaggtgctggccaggcatgtcaggccatgggaaatttatatcacacaaat
tgctttatttgttgctcgtgtggacgtgcattgcgtggcaaggcgttttataatgttcac
ggtcgcgtttattgcgaggaggattacatgtattcgggttttcagcaaactgcggaaaaa
tgtgcaatttgtggacatttgataatggagatgatacttcaagcaatgggcaaatcgtat
cacccgggatgtttccgttgctgcatttgtaatgaatgtttagacggtgtaccttttacg
gtggatgtggatcataaaatttactgcgttaatgattatcaccgtatgtttgcaccgaaa
tgtgctagctgcggcaaaggtattacacctgtagaaggcaccgatgaaacggttcgggta
gtgtcaatggataaagatttccatgtcgattgctacatttgcgaagagtgcggcatgcag
cttacagatgaaccagacaaacgctgctatccattagacggtcgcctattatgtcgctct
tgtcacttacagcgtttggctatgcagcagtcttccccacacgttcgacatcaggagcca
gtgtgcgcctcatatcagtatatgggttaa
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