Rhagoletis zephyria (snowberry fruit fly): 108369762
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Entry
108369762 CDS
T08513
Name
(RefSeq) homeobox protein caupolican-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rze03000
]
108369762
Transcription factors [BR:
rze03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108369762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
108369762
NCBI-ProteinID:
XP_017480433
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
SNPYALKEGNTGSDMSAWTSASLQPTTGYYSYDPIAAYGYGSSYDLAARRKNATRESTAT
LKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDD
DDDAMLSDDEKEKDADEVEKLNGSGGVGDGIGVGGVYGGGGGGNATMGVEMRKDDPIVKS
EMLAKEDKADGCSLDEPKYGEIPSLRSMGGGVYSSPYGQHPSYHPYQQQHTSAYYQQHQQ
QQQQQQQQQQQHVAGMAYGPPSHMSAADEYNASKNLLRAADCGIPLPASKPKIWSLADTV
GCKTPPPLLPAPPPTLPPPASSMQMSTYQQQQQQQQQQQQALMQSRQQYYQQMPPHLQQI
SQLNPHNILNSHSNSSNMQPAHNSSSSNNNNNSTSLNMMSGYVGALPYSRIPTAYAAAAS
ASAGSNSLSSSSSHNNSNGSFLNLSISSTGSNNSNHNGSTGSGSSNGSASTPPSMTQGPP
LLTAHQYHQLQQQQQQQQRLGFAEIQPDTPPQTPPNMKLANSNGGIVLNQLARGTLMGTP
TSSAPGMCYSSGVGSNNAHGGNHAAYGGNGVGIGVNYALAAARAEG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
agcaatccctatgcattaaaagagggcaacactggatctgatatgtccgcttggacctcg
gcaagcctgcagcccaccactggctactattcgtatgatccgatagccgcctatggttac
ggctccagctacgacttggcagcacgccgcaagaatgccacacgcgagtccacggccacc
cttaaagcctggctgagcgagcacaagaagaatccctaccccaccaaaggtgagaagata
atgttggccatcattacgaaaatgacgctgacgcaggtctctacgtggttcgcgaatgca
cgccgacggctgaagaaggaaaataaaatgacctgggaaccaaagaataaaacagacgat
gatgatgatgcaatgttgtcggatgatgagaaggagaaggatgccgacgaggttgagaaa
ctgaatggcagtggtggagttggtgacggtattggtgttggtggagtctacggtggcggt
ggtggtggaaatgcaacgatgggcgttgaaatgcgaaaagatgatcctattgtcaaatct
gaaatgctcgccaaagaagacaaagcagatggctgctccttagatgaaccaaagtatggc
gagataccctccctacgcagcatgggtggcggcgtgtacagctcgccctacggccagcat
cccagctaccatccctaccagcagcaacacacctcagcctactaccagcaacaccagcag
cagcagcagcagcagcagcagcagcagcaacagcacgtggctggcatggcgtacggccca
cccagccacatgagcgcagccgatgagtacaatgcatcaaaaaacctgctgcgtgcggcg
gactgtggtataccgctcccggcgagcaaacccaagatctggagtttggcagacacagtc
ggctgcaagacaccaccgccgctactgccagcaccgccacccacactgccgccgccggcg
tcgtcaatgcaaatgagcacatatcaacagcaacaacaacaacaacagcagcaacagcaa
gcgctgatgcaaagtcgacaacagtattaccagcagatgccgccgcacttgcaacaaatc
agtcaactcaatccacacaatatactcaacagccacagcaacagcagcaacatgcagcca
gcgcacaacagcagcagcagcaacaacaacaacaattcgacatcgctgaatatgatgagc
ggctacgtcggcgcattgccctattcgcgcatacctacggcgtacgcggcagcagcatcg
gcatcggctggcagcaacagtctcagttccagcagcagccacaacaacagcaacggcagt
ttcctcaatctcagtatcagcagcactggcagcaacaacagcaaccacaacggcagtact
ggcagtggcagcagtaatggcagcgcctccacgccaccctcgatgacgcagggtccgcca
cttttgacagcgcaccagtatcatcagctgcaacagcaacaacagcagcagcaacgtttg
ggtttcgccgagatacagccggatacaccgccgcagacgccgcccaacatgaaattggcg
aacagcaatggcggcattgtgttgaatcagcttgcgcgcggcacattgatggggacgccg
acgagcagcgcgccgggcatgtgctacagcagtggcgtcggcagtaacaatgctcacggt
ggaaaccatgcggcatacggcggcaatggagtgggtatcggtgttaactatgcattggcg
gcggcgcgcgctgagggttga
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