Rhagoletis zephyria (snowberry fruit fly): 108369939
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Entry
108369939 CDS
T08513
Name
(RefSeq) leucine-rich repeat protein soc-2 homolog
KO
K19613
leucine-rich repeat protein SHOC2
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_13
LRR_LRWD1
LRR_5
LRR_At5g56370
LRR_EndoS
DHU1_N
Motif
Other DBs
NCBI-GeneID:
108369939
NCBI-ProteinID:
XP_017480646
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MNLCSSAGTTESTSSLAGVDSSNEGGRSGFGSVLTTHCFGSSSNSSSSCAAAVTTSLTTN
QGSSGSGSACGGGASGSSLGNNNEMPPETRPKVVTVKHPESNKPKPTTKKSKPIQADQDV
VKALQRCREEGIKRLDLSKSSVTVIPTSVKECIHLTELYLYSNKISQLPSEIGCLVNLKT
LALNENSLTSLPESLQNCKQLKVLDLRHNKLAEIPAVIYRLRSLTTLYLRFNRIIAVAAD
IRNLTNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEEIGKCVNLNALDLQH
NELLDIPETIGNLKSLVRLGLRYNRLSSIPATLKNCKCMDEFNVEGNGITQLPDGLLASL
SALTNITLSRNAFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENV
LTALPLDVGTWVNMVELNLATNALQKLPDDIMNLQNLEILVLSNNMLKKIPNTIGNLRKL
RILDLEENHIEVLPNEIGLLHELQKLILQTNQISILPRSIGHLSNLTHLSVSENNLQYLP
EEIGSLENLENLYINQNPCLEKLPYELALCQNLKYLNIDKCPLSTIPPEIQAGGPSLVLQ
WLKMHSPYRQM
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgtgttcttctgccggtacaacagaatcaacatcatctttggcaggtgtagac
agttctaacgaaggtggcagaagtggttttggaagtgttttgaccacccattgtttcggc
agtagcagcaacagcagcagtagctgcgccgcagctgtaacgacgagtctcacaactaac
caaggaagtagcggcagtggcagcgcttgtggtggcggtgccagcggcagtagccttggc
aacaacaacgaaatgccaccggaaacacgacctaaggtggtgacagttaaacaccccgaa
tctaacaagcctaagcctacgacaaagaaaagtaaacccatacaagctgaccaggatgtc
gttaaagcacttcaacgttgccgggaagaaggcataaaacgtttggatttaagtaaatcc
tccgtcacagttataccaacatcagtgaaagagtgcattcatcttacagaactttatttg
tacagcaacaaaattagtcaactacctagtgaaattgggtgtttggttaacttaaagaca
cttgcattaaatgaaaattctttaacttcgttgccagaatcattgcagaattgtaagcag
cttaaagttcttgatttaaggcacaacaagcttgccgaaataccggcggtaatatatcgt
ctgcgttcactgaccacactctatttgcgattcaaccgtattatagcggtagccgccgat
atacgcaatttaactaatttgactatgttgagtttgcgagaaaacaaaataagggagctt
ggttcagcgattggtgcattagtaaatttgacaacgctagatgtgtcccacaaccacctt
gaacacttgcctgaggagattggcaaatgcgtgaatttgaatgcattggatttacagcac
aacgagcttttggatataccagaaacgattggcaatttgaaatctttggtccgtttgggt
ttaagatacaatcgcctttctagtattccagcaacactgaagaattgcaaatgcatggac
gagtttaatgtcgagggcaacggtataacacaattgcccgatgggcttttggctagcctt
agtgctctgacgaacataacgctgtcgcgaaacgctttcaccagttacccgaccggtggg
cctgcgcaatttactaacgtctacagtatcaaccttgaacataatcgcatcgacaaaata
ccatatggtatattctcgcgcgccaaaggtctcacaaaactaaatatgaaggaaaacgta
cttactgcgttaccactagatgtaggcacctgggttaatatggtcgaactgaatttggca
acaaatgcattacagaagttacctgatgacataatgaacttacaaaatcttgaaattcta
gttctgtccaataacatgctcaagaagattccgaatactataggtaatttgcgtaaactg
cgcattcttgacctggaagagaatcacatagaggttctccccaacgagattggacttttg
cacgagttgcaaaagttaattttgcaaacaaatcagatatcgatattaccgcgtagcatc
ggccatctcagcaatcttacgcacctgtcagtaagcgaaaataatttacagtacctgccc
gaagagattggctcgctggagaatcttgaaaatctatacattaatcaaaatccgtgctta
gagaagctgccctacgagctggcactatgccaaaatttgaaatatctaaacattgacaaa
tgtcctctgagcacgataccaccagagatacaagctggtggcccgtcgcttgttcttcaa
tggctgaaaatgcattcgccatacaggcagatgtga
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