Rhagoletis zephyria (snowberry fruit fly): 108369987
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Entry
108369987 CDS
T08513
Symbol
D
Name
(RefSeq) dichaete
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rze03000
]
108369987 (D)
Transcription factors [BR:
rze03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108369987 (D)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
108369987
NCBI-ProteinID:
XP_017480710
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MTALSSHPNYGFHLSQGLDIPTPGDYAPQNTLSPTDMDIKRVMHFSQSGGLAAISAAMGG
SPVGGHAASNGNSIMGTASMGHIGSGGHLNNGLHHLSASNHMQTAVGHQTLSPNSSIGSA
GSMGSQGSIGSLGHGQSVNAGGSSNGGSSLHHHPTSPGQEGHIKRPMNAFMVWSRLQRRQ
IAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKN
PLSGGPQALQMQAAQGQQKLGGGACPAGAGAYNPFHQLPPYFAPSHHLDQPYPVPYFGGF
DPLALSKLHQTQAAAAAAATNQSHNVLEAQKAPQLPPTTLSSFYSGIYSGISAPSLYAAH
SANAAAAGLYNSSSTSSPGSSPGTITPNGMDTSVSSAMDNALRRPVPVLY
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgacggcattatcctcgcatcccaattatggattccatcttagccagggtttagatata
cccacacctggtgattatgctccccaaaacacactcagtcctacagacatggatataaag
cgtgtaatgcacttttcgcaatctggtggattagcggctatctccgccgcaatgggtggc
tcacccgtaggtggtcacgcagccagcaacggcaactccattatgggcacggccagcatg
ggccacattggcagcggtggtcaccttaataacggtttgcaccatttgtccgcaagcaat
cacatgcaaactgccgtcggtcaccaaactctctcaccaaactcctccattggatctgca
ggcagcatgggcagtcagggttcgataggctcgttgggacatggccagagcgttaatgcc
ggcggtagcagcaatggcggcagtagtctacaccatcatcccacatcaccgggacaagaa
ggccacatcaaacggccaatgaatgccttcatggtttggtctcgtctacaacgacgacaa
atcgccaaggataacccaaaaatgcacaactcggaaatttcaaaacgtcttggtgccgag
tggaagttgctcgctgagtctgagaagcgacccttcatcgacgaggccaagcgtctgcgc
gccttacacatgaaagaacacccagattacaaatatcgcccacgccgcaaaccaaagaat
ccactctctggcggaccgcaagctctgcagatgcaagccgcgcaagggcaacagaaattg
ggtggcggtgcatgccccgctggtgctggtgcctacaatccatttcatcaactgccacca
tatttcgcaccttcgcatcacctggatcagccctacccagtgccgtacttcggaggcttc
gatccgctggcgctatccaaattgcatcaaacacaggctgccgccgctgcagcagccaca
aatcaatcacacaatgtacttgaggcccaaaaggccccacagctgccgcccacgacgctg
agcagtttctactcgggcatatattctggcatatcagcgccttccttgtacgccgcacac
tccgccaacgccgcagcggcgggactctacaactcatcgtcgacatcatccccaggctcc
tctcccggcaccatcacgccaaacggtatggacacttcggtatcatcggcgatggataac
gcgcttaggcgaccggtgccggtactgtattaa
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