Rhagoletis zephyria (snowberry fruit fly): 108370073
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Entry
108370073 CDS
T08513
Name
(RefSeq) leucine-rich repeat protein SHOC-2-like
KO
K19613
leucine-rich repeat protein SHOC2
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
LRR_1
LRR_LRWD1
LRR_13
LRR_R13L1-DRL21
LRR_9
LRR_5
LRR_Zer-1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
108370073
NCBI-ProteinID:
XP_017480807
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MHAEGGPSGSGAGGSGATTTTGTGTVVSPCLSPSSPESEGQSGSLTGMTGGPGGGGGAAG
TSTGTSASYLSDEPIPPPSPFDQPSTSHGFPSLKQDKKSSISSSSDTAKPKQVMIHSPGQ
HKPKPAITRKKTTQSGQDVEKKIQKCKEENLKHFDLIKSNLSTLPPSIRDLTQITECYLY
QNKFTSLPSEIGCLENLEFLAINENSLSSLPDSLANLKRLKVLDLRHNKLNEIPDVVYKL
TTLTNLLLRFNRIRTVGEDIKHLTNLQTLNLRENKIKELPGGIGHLCSLTTFDVANNHIE
HLPPEIGNCTKLTSLDVHHNELVDIPSTIGNLVNLNRLGLRYNRLDSVPRTLSNCTNLTE
FNVENNALSQLPEGLLSSLCNLNQLTLSRNQFTSYPVGGPAQFTTVQSINMEHNKITKIP
FGIFSRAANLTKLNMVDNQLTSLPLDIGTWTNMVELNLGTNQLAKIPEDIEHLENLEVLI
LSNNNLKKLPSSIGRLRKLRVLEIEENRLETLPTEIGYLSELQRLVLQNNQLTSIPRAIG
HLSKLTFLSVGENNLSVIPTEIGTLEHLEALYVNDNANLHCLPFELALCANLQIMSIENC
PLSQFPTDIVNGGPSLVIQYLKMKGPYRAM
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcagaaggtgggcccagcggtagtggcgctggtggctctggagccactaccacc
acaggtaccggcaccgtcgtcagtccctgtctcagtcccagctcacccgagtccgaaggg
cagtcggggtcattgacgggcatgactggaggccctggaggtggtggtggtgccgccggc
accagcaccggcacctcagcgtcctacctcagcgatgagccgattccgccgccaagtcca
tttgaccagccatccaccagtcatgggtttccctctctcaagcaggacaaaaagtcgagc
atcagctcgtcaagtgatactgccaagccaaagcaggtgatgattcactcacctggacag
cacaaaccaaagccggccattacgcggaagaagaccacccagagtggtcaggacgtggag
aagaaaattcaaaagtgcaaagaggagaacttgaagcactttgatctcatcaagtcgaat
ctctcaacgttgcccccttccattcgtgatttgacgcagattacggagtgttacctgtac
cagaacaagttcacctcgctgcccagtgagattggctgtctggagaatttggagtttctt
gccatcaatgagaactccttgtccagccttcctgattctctagccaacttgaaacgcctt
aaggttttggatctgcgacataacaagctgaacgagattcctgatgttgtgtacaaactg
acgactctcacaaacctacttctccgattcaatcgcatcagaacagtcggcgaagacatt
aagcatctgacgaacttgcaaacactcaacttgcgagagaacaagattaaagagctgccc
ggaggaattggccatctgtgcagtctgacgacctttgatgtggccaataatcacattgag
caccttccgccggagattggcaactgcacaaagctgacctcacttgatgtgcaccacaat
gagcttgttgatattccctcaaccattggtaatttggttaatctcaacagacttgggcta
aggtacaaccgccttgattcagtgccaagaacgctcagcaactgtacgaacctgactgag
ttcaacgtggaaaacaatgcactctcacaactgcctgaaggactgctctctagtctttgt
aatctgaaccagctgactctttctagaaatcaattcacctcttatccagttggtggacct
gctcagtttaccactgttcaatccatcaacatggagcacaacaaaatcactaagattccc
tttggaatcttctctcgagcggccaatctgaccaagttgaacatggtggacaaccagctc
acctcgcttccgctggacattggcacgtggaccaacatggttgagcttaacttgggaaca
aatcagctagcaaagattcctgaagacattgagcacctggagaacctggaagtgctcatt
cttagtaacaacaatctgaagaagctgcccagctctatcggtcgactgagaaaattgcga
gttttagaaattgaagagaaccgccttgaaactttaccaacagaaattggttacctcagt
gaactgcagcgccttgttctgcagaacaatcagctgacttcaattccacgagcaatcggc
cacctctcgaaactgacctttctgagcgtgggcgagaacaatctgtccgttataccgaca
gaaataggaacactggagcacctggaggcactatacgtaaacgacaacgccaatctgcac
tgtcttccctttgaacttgctctctgtgccaacttgcaaataatgagcattgagaactgt
cctctctcgcaattccctaccgacattgtgaacggcggcccctcgctggtcattcagtac
cttaagatgaaaggaccttatcgtgccatgtga
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