Rhagoletis zephyria (snowberry fruit fly): 108370107
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Entry
108370107 CDS
T08513
Name
(RefSeq) RNA-binding protein 5-B isoform X1
KO
K13094
RNA-binding protein 5/10
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rze03041
]
108370107
Spliceosome [BR:
rze03041
]
Complex A
Other components
Complex A specific factors
108370107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OCRE
G-patch
RRM_1
G-patch_2
Zn_ribbon_RanBP
OTT_1508_deam
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
108370107
NCBI-ProteinID:
XP_017480858
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MNMDRRSRSISPGNRRHRNGGNMAGGGPRRDYRRYSRSRSRSRSRERSRDQNFRRRNTRS
RSRDRMGPHRRGGSVEKDLYRDLIYDDYQEDKSYNNRGHRGRGGGGGGGIDDDYADERER
FWNERARDKGRDYERERDRERDYDRDRDRRDTRHNRYARRYENDHESDDSDESLHTHFYN
KTPSNTIIVLGLQSHITEADLMSILIQQGMTASIRLIRKRQTGASRGFAFVEFSTIDEAA
RWMELTQGSLQLPDQSCANLQYSVSPKQKVNVTDWHCFKCGVLNFKRRDICFKCYASRGD
SEKIGEGSEEVSNILTKKIMLRNLDTLTTEETVLTAMQQHVPELAGKITKILVSRDTLTQ
TSRGICYLNFDSLIDSMNLYSALKALDPPLTIDGRQLLITYCIDHENRQIVPKKNDSVTS
SSATVTIGPMTAAEMMAASGSLGAAGAEYTLADVPRLAEYSAALYASTPAEHAHYLQYYT
EYYIGEINKGHYGNLPSVQVEETSANSAAAVALSAIQRKQKKMNSIETTATQAAAAAAAA
AAAVKASLALKSVVTPKGNDGKTYPTPDVTLYQYDETSGYYYDPTTGLYYDAHSQYYYNS
ETGAYLYWDQRKSTYVLATPAAAAATVQDVVKSETGEDGKTGNSAAGSTAATATAANEDE
KKEKKDSTNKHDKVKVAKKIVKDMEKWAKQLNQKKDYTVVATPQPILPSKSDDAPTRAAG
AGAGSSGHLSSGYADVGFSILEKKERTKLVDYMPTPAIANKLTAYASDSDEEHAALGPST
SAGGSNEASEKDYVDFQKLTCLLCKRAFQSLEILQKHLKISNLHKENLQKFQLARGASGG
GDSMSVALSNYRDRAKERRQKYGESDPPVTNRSRERFEMEMKSVAARQPEAPPMPIGSNN
VGNRLLQKMGWSEGQGLGRKNQGRTSIIEAEARSSTVGLGNKSGITPGEDYKTYIKKMMK
SRYESA
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggatagacgttcacgcagcatatccccaggtaatcgccggcatcgcaatggt
ggcaacatggctggtggaggcccgcggcgagactaccgtcgctacagtcgttcccgatcg
cgctcaagatcgcgtgagcgtagccgtgaccaaaattttcgtcgccgcaatacccgctct
agatcgcgtgatcgtatgggcccacatagacgtgggggtagcgttgaaaaagatttatat
cgcgatttaatatatgatgattatcaagaggataaaagttataataatcgtgggcatcgt
ggtcgtggtggtggtggcggtggcggcattgatgatgactatgctgacgaacgtgaacgg
ttttggaacgaacgggccagggataaaggacgcgattatgaacgtgaaagagaccgtgag
cgtgattatgatcgggatcgtgatagaagagatactcgccacaatcgttatgctcgacgt
tacgagaatgatcacgagagtgatgacagcgatgagagtttgcatactcatttctacaac
aaaacaccttccaatactataatcgtgcttggtttacagtcgcatataacagaagctgat
ctaatgagcattctaatacaacaaggcatgaccgcctcgattcgtcttatacgcaaacgt
caaacaggtgcatcacgaggtttcgcattcgtcgagtttagtaccattgatgaagctgca
cgttggatggagctaacccagggctcactgcaattgccggatcaatcgtgtgccaatcta
caatatagcgtttcacccaaacaaaaggtgaatgtcactgactggcattgcttcaagtgt
ggcgttctgaatttcaaacgacgcgatatctgctttaagtgctatgcatcgcgtggtgat
agtgaaaaaatcggcgagggtagcgaagaagttagcaacatcctaacgaaaaagatcatg
ttacgcaatttggatactctaactacggaggagaccgtactcaccgccatgcaacagcac
gtgccggaattggctggtaaaattacgaaaatactcgttagtcgtgatacattaacgcag
acgtcacgtggcatttgttacttgaatttcgatagcctgattgactcgatgaatttgtat
agtgcgttgaaagcgttggatccgccattgaccattgacggccgacaattactcatcact
tattgcatagatcacgaaaatcgccaaatagtaccgaagaaaaatgattccgtaacgagt
tcttctgcaaccgttacaattggtccaatgacggctgctgaaatgatggccgcttccggt
tccctaggagctgctggagcggagtacacgctggccgatgtgccacgtctggccgaatat
agcgccgcattgtatgcgtcgacgccggcggagcatgctcactatttgcaatactataca
gagtattacataggtgaaataaataaaggtcattatggcaacttgccctctgttcaagta
gaagaaacatcagcgaattcggcagctgctgtggcgctctctgccatacaacgaaagcag
aagaaaatgaatagcattgagacgacagccacgcaagcagcagcagctgcagctgccgca
gcggcggcggtgaaagcaagtttagcgctaaagagcgttgttactccgaaaggaaatgat
ggcaaaacttatcctacccccgatgttacactgtatcagtacgatgaaacttcaggctat
tattatgatcccacaacggggctatactacgatgcacactcacaatattattacaatagt
gaaactggcgcatacctttattgggatcagcggaaaagcacttatgtgctggccacaccc
gcagccgctgcagccaccgtgcaggatgtagtaaagagcgaaacaggtgaagatggcaag
acgggtaattcagctgccggtagcacagctgctacggcgacggctgccaatgaggatgaa
aagaaagaaaagaaggactcaacgaataaacatgataaggtgaaggttgccaaaaaaata
gttaaggatatggaaaagtgggctaagcaattgaatcaaaagaaagattatacagtagtt
gcaacgccacagcctatattgccttcgaaatcggacgatgcgccgacacgagcagcgggt
gcaggcgctggtagctccggacacttatccagtggttatgctgatgtgggcttttcaata
ttggagaagaaggaacgtacaaaattggtggattatatgccgacgccggcgatcgccaac
aaactaacagcctatgcctctgattcagatgaggaacacgccgcactagggccatcaacg
tcagcaggtggctctaatgaggcgagtgaaaaggactatgtcgactttcagaaacttaca
tgtctgctatgtaagcgcgcatttcagtcgttggaaattttgcaaaagcatttaaaaatt
tcaaatttgcataaggagaatttgcaaaaattccagttggcacgtggtgcaagtggcggc
ggggactctatgagtgtagctttgtctaattatcgcgatcgcgccaaagagcgccgtcaa
aagtatggtgaaagcgatccacctgttacgaatcgcagccgtgagcggttcgaaatggaa
atgaagtcagtggcagcacgccaacccgaagcgccgccaatgccgataggttctaacaat
gttggcaatcggttactgcaaaaaatgggctggtctgagggacaaggtctaggtcgcaaa
aatcaaggacgcacaagcatcatagaggctgaagcacgttcgtctacagttggcttgggc
aacaaatctggcatcacacccggcgaagactacaaaacatacataaagaaaatgatgaaa
tctcgctatgaatcagcctga
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