Rhagoletis zephyria (snowberry fruit fly): 108370366
Help
Entry
108370366 CDS
T08513
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03013
Nucleocytoplasmic transport
rze03015
mRNA surveillance pathway
rze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108370366
09122 Translation
03013 Nucleocytoplasmic transport
108370366
03015 mRNA surveillance pathway
108370366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108370366
03041 Spliceosome [BR:
rze03041
]
108370366
03009 Ribosome biogenesis [BR:
rze03009
]
108370366
03012 Translation factors [BR:
rze03012
]
108370366
Enzymes [BR:
rze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108370366
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108370366
mRNA cycle factors
Stress granule specific factors
108370366
Spliceosome [BR:
rze03041
]
Complex C
Other components
EJC/TREX
108370366
Ribosome biogenesis [BR:
rze03009
]
Eukaryotic type
90S particles
Helicases
108370366
Translation factors [BR:
rze03012
]
Eukaryotic type
Initiation factors
eIF-4
108370366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
TniB
AAA_30
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
108370366
NCBI-ProteinID:
XP_017481182
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MDKLRKNAQAEDLSNVEFETSEDVEVVPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSIK
PIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLCLSPTRELAVQIQKVILALG
DFMNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEAD
EMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEG
IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGD
MPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR
FGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggataagctgcgtaaaaatgcacaagcagaggatctatcaaacgtagagtttgagact
agcgaagatgtagaggtggtaccaactttcaatgctatgaatctgaaggaggagctgctg
cgtggaatttatgcttatgggttcgaaaagccatcggccattcaacaacgtagtattaaa
cctattgtgaaaggtcgcgacgtcatcgcacaggcacaatccggcacaggaaaaacggcc
accttctcaatctcgattttgcaaagtttggatacaacattgcgtgaaacacaagtatta
tgtttatcgccaactcgtgagttggctgtccaaatccagaaagtgatcctggcgcttggc
gatttcatgaatgtacaatgccatgtgtgcattggtggcaccaacttgggagaagatata
cgaaaattggattacggacagcatatagttagtggtacaccgggacgagtatttgatatg
attaaaagacgtgtgctgaggactagagccattaaaatgctggtactcgatgaagcggat
gagatgttgaataaaggtttcaaggagcaaatttatgatgtatatcgctatttaccgcca
gcaacccaagttgtgttaatatctgctacattgccgcacgaaattcttgaaatgacttca
aaatttatgacagatccgattcgtattctcgtaaaacgtgatgaattgacactggaaggc
attaagcagttcttcgtcgctgttgagcgcgaagaatggaagtttgatacactatgcgat
ctctatgacacattaacaattacacaggccgtgattttctgcaacactaagcgtaaggtg
gactggttgacagagaaaatgcgcgaagcgaatttcactgtaagctcaatgcatggcgat
atgccacagaaagagcgtgacgagatcatgaaagagtttcgggctggccagtcgcgtgta
ctgatcacgacagatgtgtgggcgcgaggtatagatgtgcaacaagtgtctttggtaatc
aactatgatctgccaaataatcgtgaactgtatatacaccgcattggccgttcaggtcgt
ttcggacgcaaaggcgtcgctattaattttgtaaaatctgatgacattcgcattctgcgt
gatattgagcaatactattccacacaaattgatgaaatgccaatgaatgtggcagattta
atttaa
DBGET
integrated database retrieval system
