Rhagoletis zephyria (snowberry fruit fly): 108370440
Help
Entry
108370440 CDS
T08513
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9
KO
K25795
insulinoma-associated protein
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rze03000
]
108370440
Transcription factors [BR:
rze03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
108370440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-met
zf-LYAR
Motif
Other DBs
NCBI-GeneID:
108370440
NCBI-ProteinID:
XP_017481259
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MLNEQYTECRILPTINETFPQFGRSIATLLSPLDLSLRASNIIPITPPSTPSPPRKRQRL
MSDENSLWRPHAMGATQLTPLTTLLPATPVATTTYTHTATATETATSASAAGGNYLSQLT
SIYDCRHDELPTHHAASSGYKNNLHQIRNCFEEIPESQPTALQPNPNEPPLREQKHTHLQ
QQTPQQCQLPIICVDDETIVLTEDEEETLVSSHGYTEDMDDEEDDDDADDDVDDGNADDV
LEAVRMADFRPALYTDASSNESKKEVGECRGNDEHGGDGEDEEEYVDILSNDDDDLNPLN
SANFTQHLQSRALEEELEKTGKVLTRNKLTYDNEELHHRAIDGLAKLFERDFLVPKSAAE
TQGNILVTNKQTNVAFTADLQERHRAAPGEKPSLKANSFGRAHQQRSHHKSERKRMKLRK
HQLALDEETISPVSGTIIRKLRDDEELVVRKGDIDPAFNVVEITEEAKAILASIDNKIGA
YLCQLCRTLYDDAFQLAQHRCPRIVHIEYKCSECEKVFNCPANLASHRRWHKPKSELMAS
SGQSKKRQQYEQTTAQGGMGHEKRNAADDGPEGVYPCVQCGKNFRRQAYLKKHQASHQML
ENLKSLDIFKNSAAIRNPSFPHSMPQPKSHFSFSNAPATATSSRLPHIHAAHFNNPHTHT
IKPYPQRLNAFPFDQRRFYSLSDFYLSQHLDHSHSAFQYVQANHLRNLTTVAGAFAPRAQ
LVPPPPSALVAX
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacgaacaatacacggaatgtagaattctacccaccatcaacgaaacttttcct
caatttggtcgatctattgcaacgttgctctcgccacttgacttatcgctgcgcgcctcc
aacatcataccgataacgccaccctccacaccctcaccgccgcgtaagcgtcaaagatta
atgtcagacgagaatagcctctggcgaccgcatgccatgggggcaactcaactaacaccg
ctaaccacgttgctaccagcaacacccgtagccacaaccacatacacacacacagcaaca
gcaacagaaacagcaacttcagcctcagccgctggtggcaattacctgtctcaactaact
tcaatctacgattgtcgtcacgacgaattaccgacgcatcatgcagcgtccagcggatat
aaaaacaatttacaccaaataagaaactgctttgaagaaattccagaaagtcaaccaacc
gcattgcaacccaacccaaatgaacccccgttacgagagcaaaaacatacgcacttacaa
caacaaacgccacaacaatgccaattgcccattatatgcgtggacgatgaaacgattgtg
ttgaccgaggacgaggaagaaacacttgtcagttcgcacggatacaccgaggacatggac
gacgaagaggacgacgacgacgccgacgacgacgttgatgatggcaacgccgacgatgtg
ttggaagcagtcaggatggctgactttagaccagcattgtacacagatgccagcagtaat
gaaagtaagaaagaagtaggcgagtgcaggggaaatgatgagcatgggggtgatggtgag
gatgaagaagaatacgtagacatcttgagcaacgacgacgacgacttaaatccgctcaat
agcgctaatttcacacaacatctgcagagccgagcattggaggaagagctcgaaaagacc
ggcaaagtattgacgcgcaataaactcacctatgacaatgaagagttgcaccatcgagcc
attgacggtttggccaagttattcgaacgagattttcttgtgccaaagagtgcggcagaa
acgcaaggcaatattttagtaacaaacaaacaaacgaatgttgcgttcaccgccgacttg
caagaacgtcacagagcagcgccaggggaaaagccctcgttaaaagcgaatagttttggt
cgtgcccaccagcaacgcagccatcataaatcggagcgaaaacgcatgaaattgcgaaaa
catcaactcgcactcgacgaggagaccatcagccccgtctcgggcaccatcatacggaaa
ttgcgcgacgacgaagagttggtggtgcgcaaaggtgacattgatccggctttcaatgtg
gttgaaatcaccgaagaagctaaggcgattttggccagcatcgacaacaaaatcggcgct
tacttgtgccaactgtgtcgcacactgtacgatgatgcattccaattggcacagcaccgg
tgtccacgcatcgttcacatcgaatataaatgctccgagtgcgaaaaggtctttaattgc
ccagctaacttagcctcacatcgccgctggcacaagcccaagtccgagctaatggccagc
agtgggcagagcaagaagcggcaacaatacgaacaaaccactgcgcaaggaggcatggga
catgaaaagcgaaatgcagctgatgacggaccagagggagtttatccatgcgtgcagtgc
ggaaaaaatttccgacgccaagcctatttgaaaaagcatcaagcatcacaccaaatgctg
gaaaatctcaaatctttggacatcttcaaaaactctgctgccattcgaaatccgagtttt
ccgcattcaatgccacaacctaaaagccatttcagcttttccaatgcaccggcgaccgca
acgtcttcgcgtttaccccacatacacgccgcccacttcaacaaccctcacacgcacacc
atcaaaccctatccgcagcgtttgaacgcatttcccttcgatcaacgacgcttctattca
cttagtgacttttatctctcccaacacttggatcattcgcattccgccttccagtacgtg
caggccaatcatttgcgcaacctaaccactgtagctggtgcctttgctccacgcgcccaa
ctggtaccgccgccgcccagtgctttggttgcangttaa
DBGET
integrated database retrieval system
