Rhagoletis zephyria (snowberry fruit fly): 108370705
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Entry
108370705 CDS
T08513
Name
(RefSeq) carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rze01009
]
108370705
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108370705
Enzymes [BR:
rze01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108370705
Protein phosphatases and associated proteins [BR:
rze01009
]
HAD phosphatases
Fcp/Scp phosphatases
108370705
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108370705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
108370705
NCBI-ProteinID:
XP_017481574
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MDATSIITQVSRDDEQLNVCANEKDDVERLKPPKRGFFQSFLCCWRRNRTKTNQNGTSID
GSTTPPPLPDQQRYLLPQVRHSDMHKKCMVIDLDETLVHSSFKPIPNADFIVPVEIDGTI
HQVYVLKRPYVDEFLRKMGELYECVLFTASLAKYADPVADLLDKWDVFRARLFRESCVYY
RGNYIKDLNRLGRDLQKIVIVDNSPASYIFHPDNAVPVKSWFDDTNDSELLELIPLFEKL
SKVDSVYSVLCNSNNPLNSVAKINNTNQQQMSTPQAQLQQSLQHQQQQMQIQSTHPQNQQ
QSVQQTITATTVITQATTISVPTLLTTTHQHQHQHQHQHQHQLHQHNQQQQQQQNQLQTN
QQQQHQQLEGSPPNPPELSNKT
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaacatcaataatcacacaagtctcacgcgacgatgagcagttgaacgtgtgt
gcaaatgagaaagacgatgtcgaacgcttaaaaccaccaaaacgcggcttctttcaatcc
ttcctatgctgctggcgacgtaatcgcacgaaaaccaatcaaaatggcacatcaatcgat
ggttccacaacaccgccaccattaccggaccaacaaaggtacctactacctcaggttagg
cactcggatatgcataaaaaatgcatggtcatcgatttggatgagacattagtgcacagt
agttttaagccgattccaaatgctgattttattgtaccagtggaaattgatggcaccata
catcaagtttacgtactcaaaaggccctacgtcgatgagttcctgcgaaaaatgggcgaa
ttgtacgagtgtgttttatttacagcatcactagccaaatatgcagatcccgttgccgat
ctgttagacaaatgggatgtatttcgtgcaagactgtttagggaatcgtgcgtttattac
aggggaaattatattaaggatctaaatcgtcttggacgtgatttacaaaaaatcgtcatt
gtcgataattcaccagcgagttatatatttcatccagataatgcggttcctgtaaagtca
tggtttgatgacacaaacgattccgaattacttgaactgataccgctgtttgagaaactt
agcaaagtcgattctgtatacagcgttctgtgcaattccaacaatccactgaatagtgtt
gcgaaaatcaacaacacgaatcaacaacaaatgtctacaccgcaggctcagttgcaacaa
agtttgcaacaccaacaacaacagatgcaaatacaatcgacacatccacagaatcaacag
cagtcagtgcaacaaacgattacagcaacaacggtcatcacacaagcgacaacaatatca
gtgccgacattgctgacgacaacgcatcagcaccagcaccagcaccagcaccaacatcag
catcagctgcatcaacacaaccaacaacaacagcaacaacaaaatcaactgcaaacaaac
cagcagcagcagcatcagcagctggaaggtagtccgccaaatccgcccgaattaagtaat
aaaacgtaa
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