Rhagoletis zephyria (snowberry fruit fly): 108370853
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Entry
108370853 CDS
T08513
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor alpha-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04080
Neuroactive ligand-receptor interaction
rze04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108370853
04082 Neuroactive ligand signaling
108370853
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rze04040
]
108370853
Ion channels [BR:
rze04040
]
Ligand-gated channels
GABA-A
108370853
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Heliorhodopsin
Motif
Other DBs
NCBI-GeneID:
108370853
NCBI-ProteinID:
XP_017481761
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MAKIIVEVTTTTTEASCIPLAQSTTTTTHHHKPSAAPSATHASGRHQIGLLSSFMRRLLK
LLISCILMPAIQHHIHINWSPMSTSPTSSMVVHASAISVSVSMSTTNATNVAGVSVRSAD
HDVGVMSAAAALSGLGSRAPASWSVAASHMRLTQRNNHANISELLDNLLXGYDNSIRPGF
GGPPTTVEVDIMVRSMGPISEVDMTYSMDCYFRQSWVDKRLAFKGAQDTLALSVSMLARI
WKPDTYFYNGKQSYLHTITTPNKFVRIYQNGRVLYSSRLTIKAGCPMNLEDFPMDIQKCP
LKFGSFGYTTADVVYRWNRERPAVAIAEDMKLSQFDLVDCPAGNLTDVIYKAAAPHDATS
DSSNNRGGNRNSNNYYYNNKNTGNDFNHNRYNQKYGSKSMSTFAGPGAKNQHVRGTGSQL
DKGAFGAEYSMLMVNFHLQRHMGNFLIQVYGPCCLLVVLSWVSFWLNREATADRVSLGIT
TVLTMTFLGLEARTDLPKVPYLTALDFFVFLSFAFIFATILQFAVVHYFTKYGSGECYFI
IEEMDSDTESDADARTLKSEFNESTDSRLYEVIPLSMCSIPIHGAGKGSTSSSGIGVGAR
SRRNSGANRRMLAGGRNEAAGGGRYNFNCFAWPCFRRRKRGRVGFDMSDEDDEEAHLRAS
EEPTPHRASGKRRMSFYRREELEARRKGKRVPQYNSVSKIDRASRIVFPMLFLLINVFYW
YGYLSRSSRILANTPTTT
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaatcatcgttgaagtgacaacaacaaccaccgaggcatcatgcattccgctg
gcgcaatccaccaccaccaccacccaccaccacaaaccttcagcggcgccttcagcaacc
cacgctagtggccgccaccaaattggccttttaagcagcttcatgcgtcgcttattaaaa
cttttgattagctgcattctcatgccggccatacaacatcacattcacattaattggtct
ccaatgtccacatctccaacgtccagcatggtggtgcatgcatctgccatctccgtttct
gtctcgatgtccacaacgaatgcaaccaatgtcgccggagtgtctgtgcgtagcgctgac
catgacgtcggtgttatgtctgctgcagcggctttgtccggcttgggttcacgtgcgccc
gcttcctggtcggtggctgcttctcacatgcgcttgacgcaacgcaacaatcatgcgaat
atttccgagttgctggacaatttattancgggctatgataatagcatacgaccgggattt
ggcggtccacctactacagttgaagttgatataatggtacgcagtatgggccccatttcc
gaagtggatatgacatattccatggattgctatttccgtcaatcgtgggtggataaacgt
ttagccttcaagggcgcacaggatacattggctttgagtgtttcgatgttggcacgcatt
tggaaacccgacacttacttctataatgggaaacaaagttatctacataccattacgaca
ccaaataaatttgtgcgcatctatcagaatggcagggtgttatattcgagcagattaaca
atcaaagctggctgtccaatgaatttagaagactttcctatggatatacaaaagtgtcca
ctaaagtttggctcatttggctacacgacagcggatgttgtttatcgttggaatcgcgag
cgaccagctgttgccattgctgaggatatgaaattgtcacaattcgatttggttgattgc
cccgctggcaacctcaccgatgtgatctacaaagccgctgcaccgcatgatgcaacatcg
gacagcagcaacaataggggtggcaatagaaatagcaacaattactactacaacaacaag
aatacgggcaacgatttcaaccacaatcgttacaatcagaaatatggcagcaaatcgatg
agtacgtttgcggggccgggtgcaaagaatcaacatgtacgcggtactgggtcgcagttg
gacaaaggtgcctttggtgctgagtactcaatgttaatggttaattttcacctacaacgc
catatgggcaattttctcatacaagtctacggcccttgctgtctactggtcgttctatcc
tgggtctcgttctggcttaatcgtgaagctaccgcagatcgcgtctcgctgggcataacc
accgtactgacaatgacatttctcggtttggaggcacgtaccgatctgccaaaggtgcct
tacctcaccgcattggatttcttcgtattcctctctttcgccttcatctttgctacaatt
ctacaattcgctgtcgtacattactttaccaaatatggttcgggcgaatgttatttcatt
atagaggaaatggattcggataccgaatcggatgctgatgcacgtacgcttaaaagcgaa
ttcaatgagagcaccgattcaaggctctatgaagttataccgctttcgatgtgttcgata
ccgatacatggcgcgggcaaaggttcgacgagcagcagcggcatcggtgtgggtgcacgg
tctcgtcgcaattcaggcgcgaatcggcgtatgcttgccggcggtagaaatgaagctgct
ggtggtggtcgttacaacttcaattgtttcgcgtggccatgtttccgacgtcgcaagcga
gggcgcgtcgggttcgatatgtccgacgaggatgatgaggaggcacatttgcgagcgagt
gaagaacccactccacatcgtgcctccggcaagagacgcatgtccttctatcgacgcgaa
gagttagaggcgcgtcgcaaaggtaagcgtgtgccgcagtacaattccgtttcgaaaatc
gatcgcgcatcacgtatcgtctttccgatgctctttctactcatcaatgtattctattgg
tatggttatttgtcgcgcagctcacgaatattagcgaatacgccaacgaccacctga
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