Rhagoletis zephyria (snowberry fruit fly): 108371146
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Entry
108371146 CDS
T08513
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108371146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rze03009
]
108371146
Ribosome biogenesis [BR:
rze03009
]
Eukaryotic type
Pre-60S particles
GTPases
108371146
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
GTP_EFTU_D2
EFG_III
EF-G_D2
MMR_HSR1
EFG_IV
Motif
Other DBs
NCBI-GeneID:
108371146
NCBI-ProteinID:
XP_017482136
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MPIIDTNTLVKLQKDIERVRNICILAHVDHGKTTLADSLVASNGIISQRMAGKLRYLDTR
QDEQERGITMKSSSISLYYRGGADNADNEQDYLVNLIDSPGHVDFSSEVSTAVRLCDGAI
VVVDVVEGVCPQTRACLEQVYTEQLKPVLVLNKIDRLIMEMQLKPLDAFFHISQILEQVN
AVLGSIFASDVLSKEDITKKDNYESALEEVDDSNLYFSPAAGNVIFCSAYDGWAFSVSDF
AKIYSKRLEMTQSDLEQVLWGDFFYNTKQKYALAGAQEKAKKPMFVQFVLENIWSLYDII
AVRKDKEKLPIIAEKLGIKLQARDLRISDPKVQIKTVFGQWLPIDRTVLEMVVRHVPPPN
VISDERAERLLFPRNVALNAYSKETLLLKEDFKRCSDESLNVIVFVSKMTPVHVSQLPQN
KPKRLNEEQLQARREEVRRRIEDRKQFAEKAELENLTVGIEQLNVEETPAQTEVQKNVEQ
EPPEKADYVFIAFARIFSGTLKTGMRLYNLAPKHDPRNKEQLNSDSPYISEVTIGDLYLF
MGGELQALDEVPAGNIVGIGGLDEDIIKTATLSSTINCTSFSELSVMATPILRVAIEPVN
PQDLPKLVKGLKLLNQADACVEVSMAPTGEHVITTLGEVHVEKCVRDLEESYAKIKVNVS
EPIVSFRETIVPEATIDMVNEAIIKTATDKDITKKIITQQTANKFGTIRVIALPLPQTAV
DILDKYISFFKELATNVKGITVSEKYSTLIAQIKTQLTNALTEFDLKGLTALKPTELVER
IWALGPRNCGTNILLNLTDYEQPNFWQSLTHQIDVDAIAKAVSDVRRDYNSSFVNGFQLV
TAAGPLCEEPMQGVAFVVLEWTVEANEDLNSKSYGPFSGQVLTASKESCRMAFQAQPQRL
VSPMYSCNIVVNAEVLGKMYAVIGRRHGKILSGDLTQGSGNFSVMAILPVIESFNFAQEI
RKQTSGLACPQLMFSHWELVRMLMTMPPHITLY
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcctattatagacacaaataccttggtgaaactccaaaaagacattgaacgtgtgcgc
aatatttgcattttggcacatgtagatcatggcaagacaacacttgctgactcacttgta
gccagcaatggcataatttcacaacgtatggcaggtaagctgcgctacctggacacccgt
caagatgagcaggaacgtggcataactatgaagagcagcagtatatcgctatattaccgt
ggcggcgctgacaatgctgacaacgagcaagactatctcgttaatttgattgattcaccg
ggacatgtggacttttccagtgaagtttcaacagctgtgcgcttgtgtgatggcgccatt
gttgtggttgatgtggtcgaaggtgtttgcccacaaacgcgcgcatgcttagaacaagtt
tatacagaacaactaaagcccgttctggttttaaataaaattgaccggcttataatggaa
atgcagcttaagccattagatgctttctttcatatatcgcaaattttagagcaggtgaat
gctgtgctgggtagtatatttgcctccgatgtgctttcgaaggaggatataacgaaaaag
gacaactatgagtctgcattggaagaagtcgacgattcaaatttatatttttctccagct
gccggtaatgtcatattttgttccgcttatgatggttgggctttctcggtgagcgatttc
gccaaaatatattcaaaacgtttagaaatgacgcaatcagatctcgaacaagttctctgg
ggtgattttttctacaacaccaaacagaaatatgcacttgccggtgcacaagaaaaggct
aagaaacctatgtttgtgcaattcgttttagaaaatatttggagcctatatgatatcata
gcagtacgcaaagataaggaaaaattaccgattatcgcagagaaattgggcataaaatta
caggctcgtgatttacgtatttcggatcccaaagtacaaataaaaactgttttcggacag
tggttgcccatagatcgcactgtgctggaaatggtggtgcgacatgtgccgccaccaaat
gtcatttccgatgaacgcgcagaaagattgctctttccacgcaatgtagcgttgaatgca
tattctaaagaaactttgttgttgaaggaagattttaaacgttgcagcgatgagagcctt
aacgtcattgtgtttgtttctaagatgacgccagtgcacgtttcacagttgcctcaaaat
aagcccaagcgtttgaatgaggaacagttgcaagcccggcgtgaagaagtgcgtcgtcgg
attgaagatcgaaagcagtttgctgaaaaggccgaactggaaaatctaaccgtcggcata
gagcaactgaatgtagaagaaacacctgcacaaactgaggtccaaaaaaatgtcgagcag
gagccacctgaaaaggcggattatgttttcattgcttttgcgcgcattttcagtggtact
cttaaaacgggtatgcgactgtacaatttggcgcccaaacatgatcccagaaataaagag
cagctgaattcggactcgccttacataagcgaagtgacgataggggatctgtatttgttt
atgggtggtgagctacaggcacttgatgaggtacctgctggtaacattgtgggcataggc
ggtttggatgaagatattattaaaacggcaacattgagcagcaccatcaattgtacgtca
tttagcgagttaagtgtaatggccacacccattttgcgtgtagctattgagcccgttaat
ccacaggatttgcccaaacttgtgaaggggctgaaattattgaatcaggcagatgcatgc
gttgaggtatcaatggcgccaactggcgagcatgtaatcactacattaggtgaagtgcat
gtagaaaaatgtgtgcgggatctagaggaaagctatgcaaagattaaagtaaatgtgtcc
gagcccattgtatctttccgcgaaacaatagtgcctgaagccactatcgatatggtgaac
gaagccatcataaaaacagctacagacaaggatataacaaaaaagattatcacacaacaa
acagccaacaagtttggcacgatacgtgttatagctttgccactgccccagactgctgtg
gacatattggataaatatattagcttctttaaagaattagcgacgaacgtaaaaggcatt
actgtatccgaaaagtattcgacgctaatagcgcaaataaaaactcaacttaccaatgct
ttaactgagttcgatttgaaaggcttaactgcgctaaagccaacagagctcgtagagcgc
atttgggcactaggtccgcgtaattgcggcacgaatatcctcttgaatttgactgattat
gaacaaccaaatttctggcagtcactcacacatcaaattgatgtagatgccattgccaaa
gcggtgtctgatgtacgtcgggattataatagttcatttgttaacggttttcaattggtg
accgctgctggcccgctatgtgaagagcccatgcagggtgtggcttttgttgtgctcgaa
tggactgtggaagcaaacgaggatttgaattccaagtcgtatggtcctttttcaggacaa
gtgttaactgcatcgaaagagtcatgtcgcatggcattccaggcacaaccacaacgtctg
gttagtcctatgtacagctgcaacattgtggtcaatgctgaagttctaggtaaaatgtac
gctgttattggtcgacgtcatggcaaaattttatcgggcgatctaactcaaggcagtggc
aatttctcagtcatggcgatattaccagtaattgaatcgtttaatttcgcacaggagata
cgtaagcaaacctcgggactagcttgcccacaattgatgttcagccattgggagcttgtc
cgaatgcttatgaccatgccacctcatatcacgctttactaa
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