Rhagoletis zephyria (snowberry fruit fly): 108371315
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Entry
108371315 CDS
T08513
Name
(RefSeq) DNA topoisomerase 2-alpha-like
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rze03032
]
108371315
03036 Chromosome and associated proteins [BR:
rze03036
]
108371315
Enzymes [BR:
rze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
108371315
DNA replication proteins [BR:
rze03032
]
Eukaryotic type
DNA Topoisomerases
108371315
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
108371315
Centrosome formation proteins
Centriole proteins
108371315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
HATPase_c_3
ComGE
Motif
Other DBs
NCBI-GeneID:
108371315
NCBI-ProteinID:
XP_017482347
LinkDB
All DBs
Position
Unknown
AA seq
1624 aa
AA seq
DB search
MSDTDDFSDEDGAAFLEAATAGGKKQNGKKLSIERIYQKKTQLEHVLLRPDTYIGSVEME
TKSMWVWEEVDGVGKMVFRDISYVPGLYKIFDEILVNAADNKQRDKTMNCIKIDIDPEKN
EIVIYNNGKGIPVIEHKEEKLYVPTLIFGHLLTSSNYDDNEKKVVGGRNGFGAKLCNIFS
NRFKVETSYKEYSKSFSQVWTDNMKNAKEAKISKNSSEDFTRISFSPDLSKFKMDKLDND
IVALFSRRAYDVAGSSKGVKVYLNGKRLMVNGFKEYVELFVKDKEDEVGNPIKVAYEAVN
DRWEIAATVSDRGFQQNSFVNSIATTRGGKHVDYVTDQIVGKLADIIKKKNKAGISVKPF
QIRNHLWVFVNCLIENPTFDSQTKETMTLQSKSFGSKCVPNEKFFNTVVKVGVVEAILSW
VKFKAQSELSKKCHAKKHAKLTGIPKLEDANDAGTKNSIDCTLILTEGDSAKSLVVAGLG
VVGRDKYGVFPLRGKMLNVREASHKQIIENAEINNIIKIVGLQYKKTYQSVEDLKSLRYG
KLMIMTDQDQDGSHIKGLLINFIHHNWPSLLKLNFLEEFITPIVKASKGNDVHSFYSLPE
FEEWKKEVHNWRTYKIKYYKGLGTSTSAEAKEYFSDMNRHRIRFVYTGSEDDHFVQLAFS
KKCVEQRKDWLTNSMDERKRRRELGLSEMFLYEKNTRQVSYKDFVNKELILFSNMDNERS
IPSLVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVGEHSAYHHGEVSLMSTIINLAQD
FVGSNNINLLMPIGQFGTRLQGGKDAASARYIFTMLSPLARKLFSQLDEPLLNYLYDDNL
KIEPEYYVPIIPMVLVNGAEGIGTGWSTKIPNYNPRDIVDNIRRMMRGEEVKVMKPWFKG
FTGSIEQLDAQRFVVNGEAAILSSKSFEITELPIRVWTQTYKESVLETFLNGTEKMPSFI
TDYKEYHTDATVKFTVTMSEDNLRKTLDGGLHKTFKIQSTLSTTSMVLFDANGVLRRYET
PEDILREFFPLRLEHYSKRKKYYEGILDAETLKLENQARFILEKNDRILVMENIRKKEFI
AQLIKRNYDTDPVKVWKKRYAEKDDDVQSSSDSDSDDGHDKKYDFDYLIDMSMRSMLREK
VDELTKLRDQKKAELTKLRASSPEDLWEEDLRAFLEELKTLEKQERELLLNGDAKTAKMS
KTASRTIKAAKMVITEDHKPSPDGERVIPKIDNELLKKAGQLVKPKQQQQQESSKAAEKM
EQETEEQERKEARPVKPSTADDDSSDSSDGYVPLEKRIGKSPQLIDKKFSLITKTLDRAA
DSEAASKPPAEPEEKKKKPAPKKRAPKAKDTNGDHVPKKGAAGKGKKKGRNPWSESDESD
GEQSEQELDFTDSSEEEVMPVRKKNGIAADKKNGENGQVAEKVAAAAAAPETAPARTKFD
SDDDLFASKPEPEKKKKTSEELFDSIFTPTGPSSTTSSKDNSERQEAIDKLLSREPMFND
SSDDSFDQPKPSSPKVTASKPAAKPKAKKKPPKKASSDDDASDSDDFKPTKAAAKKPAAK
SRKKKKSSDSEEEKPSKKKSKTKSVAETMDETFNELPPEFRTKTGRIRKPVNYNLADSSE
EDDF
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacacggacgacttttccgacgaggacggcgcggcctttctcgaggcggcaact
gctggcggcaaaaagcaaaatggcaaaaaactcagcattgaacgcatctaccagaaaaaa
acgcagctcgagcatgtcctccttcgacctgacacctacattggctcagtggagatggag
accaagtcaatgtgggtctgggaagaggtggacggcgttggcaagatggtctttcgagac
atttcctacgttcctggactgtacaaaatttttgacgagattctcgtcaatgcagccgac
aacaagcagcgtgacaagacgatgaactgcatcaaaattgacattgacccagaaaaaaat
gaaattgtcatttacaacaatggcaagggcattcccgtgattgagcacaaggaggaaaag
ctctatgtgccgacgctcattttcgggcacctgctgacgtcgtccaactacgacgacaat
gagaaaaaggtggtcggcgggcgcaatggttttggcgccaagctgtgcaacattttttca
aaccgcttcaaggtggaaacctcctacaaagagtacagcaagtccttttcccaggtgtgg
acggacaacatgaagaacgccaaggaggcaaaaatttccaaaaactcgagcgaagacttt
acgcgaatctccttttcgcctgacttgtccaagtttaaaatggacaagctggacaatgac
attgtggcgctcttttcgcgtcgagcctacgacgtggccggctcctccaagggcgtcaag
gtgtacctgaatggaaagcgattgatggtgaatggcttcaaggagtacgtggagcttttt
gtcaaggacaaggaggacgaggtgggcaaccccatcaaggtggcctacgaggcggtcaat
gatcgctgggagattgccgccaccgtcagcgaccgaggctttcagcaaaacagctttgtc
aacagcattgccacgacgcgaggcggcaaacacgtcgactatgtcaccgaccagattgtc
ggcaagctggcagacattattaaaaagaaaaacaaggcgggcatcagcgtcaagcccttt
cagattcgcaaccacctctgggtctttgtcaactgcctcattgagaatcccacctttgac
tcgcagaccaaggagaccatgacgctgcagagcaagagctttggctccaagtgcgtcccc
aacgaaaagtttttcaacacggtcgtcaaggtgggcgtcgtcgaggcgattctctcctgg
gtcaagttcaaggcgcagagtgagctgtcgaaaaagtgccacgccaagaagcacgccaag
ctgacgggcattcccaagctggaggacgccaatgacgccggcaccaaaaactcgatcgac
tgtacgctgattctcaccgagggcgactcggccaagtcgctggtggtggccggcctgggc
gtcgtcggccgcgacaagtatggcgtctttccgctgcgcggcaaaatgctcaacgttcgc
gaggcctcgcacaagcagattatcgagaatgccgaaatcaacaacattatcaaaattgtc
ggtctgcagtacaaaaagacgtaccagagcgtggaggacctcaagagcctgcgctacggc
aagctgatgattatgactgatcaggaccaggacggctcgcacattaaggggctgctaatc
aactttatccaccacaattggccgtcactgctaaagctcaactttttggaggagtttatc
acgccgattgtcaaggccagcaagggcaacgacgtgcactcgttttacagcttgcccgag
tttgaagagtggaaaaaggaggttcacaactggcgcacctacaagattaaatactacaag
ggtttgggtacttcgacgtcggccgaggccaaagagtacttttccgacatgaaccgccac
cggattcgctttgtctacacgggcagcgaggatgaccactttgtgcagctggcgtttagc
aaaaagtgcgtcgagcagcgcaaagactggctgaccaactcgatggacgagcgcaagcga
aggcgcgagctcggcctgtcggaaatgtttttgtacgagaaaaacacgcgccaagtctcg
tacaaggactttgtcaacaaggagctgattctctttagcaacatggacaatgagcgctcc
attccgtcgctggtggacgggctcaagccgggccagcgcaaggtgctctttacctgcttc
aagcgcaacgacaagcgcgaggtcaaggtggcgcagctggccggctcggtgggcgagcac
agcgcctaccaccacggcgaggtctcgctcatgtcgaccatcatcaacctggcgcaggac
tttgtcggcagcaacaacattaacctgctgatgcccattggccagtttggcacccgcctg
cagggcggcaaggacgccgccagcgcccgttacatctttaccatgctcagtccgctcgcc
cggaagctgtttagtcagctggatgagccgctgctaaactacctgtacgatgacaacctc
aagattgagcccgagtactatgtgcccatcattcccatggtgctggtcaacggcgccgag
ggcattggcaccgggtggagcaccaagattcccaactacaatccacgggacattgtcgac
aacattcggcggatgatgcgcggcgaggaggtcaaggtgatgaagccctggttcaagggc
tttaccggctccattgagcagctggacgcgcagcgctttgtcgtcaacggcgaggcggcc
attctctcgagcaagtcgtttgaaattaccgagctgccgattcgcgtgtggacgcagacg
tacaaagagtcggtgctggagacgtttctcaacggcactgaaaagatgccctcctttatt
accgactacaaggagtaccacactgacgcgacggtcaagtttaccgtgaccatgagcgag
gacaatctgcgcaagacgctggacggcggcctgcacaagacgtttaaaattcagtcgacc
ctctcgacgacgtccatggtgctctttgacgccaacggcgtcctgcgcaggtacgagacg
cccgaggacatactgcgcgagtttttcccccttcgcctggagcactactcgaagcgcaaa
aagtactacgagggcattctcgacgccgagacgctcaagctggagaaccaggcgcgcttt
atactggaaaagaatgaccgcattctggtgatggaaaatattcgcaaaaaggagtttatt
gcccagctcatcaagcgcaactatgacactgacccggtcaaggtgtggaagaagcggtac
gcggaaaaggacgatgacgtccagtcgagcagcgactcggactcggacgatggacatgac
aaaaagtacgactttgattacctgattgacatgagcatgcggagcatgctgcgcgaaaag
gtcgacgagctgaccaagctgcgagaccagaaaaaggccgaactgaccaagctgcgcgcc
tcgtcacccgaagacctctgggaggaggacctgcgcgcctttctcgaggagctcaaaacg
ctggagaagcaggagcgcgagctgctgctcaacggcgacgccaagacggccaaaatgtcc
aaaactgcctcgcgcaccatcaaggcggccaagatggtcattaccgaggaccacaagccg
tctcctgacggcgagagggtcattccaaagattgacaatgaactacttaaaaaggcgggc
cagctggtcaagccaaagcagcagcaacagcaggagagcagcaaggcggctgaaaagatg
gagcaggaaacggaggagcaggaaaggaaggaggctcgtcctgtaaagccctcgacggcc
gacgacgacagctccgacagctctgacggctacgtgccactggagaagcgcattggcaaa
tcgccccagttgattgataaaaagtttagcctgattaccaagacgctggacagagctgcc
gacagcgaggcggcaagcaagccgccagccgagcccgaggagaaaaagaaaaagccggcg
ccgaaaaagcgagcacccaaagccaaagacaccaacggtgaccacgtacccaaaaagggg
gcggcaggcaagggcaagaaaaagggccgcaatccttggtcagagtcggacgagagcgac
ggcgagcagtcggagcaggagctcgattttaccgactcgtcagaggaagaggtgatgccg
gtgcgcaaaaagaatggcattgctgccgacaagaagaatggcgaaaatggacaggtggct
gaaaaggtggcggcggcggcggcggcccctgagactgcaccggcccgcaccaaatttgac
agcgacgatgacctgtttgccagcaaacccgagccagaaaaaaagaaaaagactagcgaa
gagctgtttgattccatctttacgcccaccggtccctcgtcgacgacgagcagcaaggac
aactcggagcgacaagaggccattgacaagcttctctcgcgagagcccatgtttaatgac
tcttcggacgactcgtttgatcagccaaagccatcgtcacccaaggtgacggccagcaag
ccggcagccaagccaaaggccaaaaagaagccgcctaaaaaggcgtcctcggacgacgac
gccagtgactcggatgactttaagccgaccaaggcggcggcgaaaaagccagcagccaag
tcgagaaaaaagaaaaagtcgtctgattcggaggaggagaagccgtcaaaaaagaaatca
aagaccaaatcggtggccgagaccatggacgagacgttcaacgagctgccgcccgagttt
cgaaccaaaacggggcgcattcgaaagcccgtcaactacaaccttgccgactcttcggaa
gaggatgacttttag
DBGET
integrated database retrieval system
