Rhagoletis zephyria (snowberry fruit fly): 108371641
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Entry
108371641 CDS
T08513
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108371641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108371641
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
108371641
Prokaryotic type
Archaeal type
TFE
108371641
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE-A_C
TFIIE_alpha
Zn_Ribbon_TF
Cas12f1-like_TNB
ARM_CPL3
Zf-C2H2_ZNF451_C
DUF2478
zf_DPOE_2
A24_N_bact
WHD_POLR3C
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
108371641
NCBI-ProteinID:
XP_017482724
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MANATETKYVTEVPSSLKQLARLVVRGFYSIEDALIIDMLVRNPCMKEDDIAELLRFEKK
QMRARISTLRNDKFIQIRLKMETGPDGKAQKVNYYFINYKTFVNVVKYKLDLMRKRMETE
ERDATSRASFKCTNCDKTFTDLEADQLFDFTTGEFRCTYCGSPVEEDSSAMPKKDSRLML
ARFNEQLQPLYDLLREVEGIKLAPEILEPEPVDIDTIRGLNKPLNQRPDGQQWSGEATRN
QGFAVEETRVDVSIGGDVQEAVTERKARPVWMTESTVITEDNHDATDAILNEAAQSSTQH
TISVGGSTNNRSKKENEDIMSVLLQHEKQTNQKDSPAKGLKYGSSNADSSDSSDDDKDID
NMKIPKVDYNNFINSESEDDDDDIPTVHVSGRPHPIDQINDELIAQMTQQEKENYIHVYQ
QHYSHIYD
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgccaccgaaaccaagtatgtcaccgaagtaccaagcagtctaaagcaactg
gctcgtcttgttgtccgcggcttttactcgatcgaagatgcgctcataattgacatgttg
gtgcgaaatccttgcatgaaggaagatgatattgcagagctattacgtttcgaaaagaaa
caaatgcgcgcacgtatctcaactttgcgcaatgacaaatttatacagatccgtttaaaa
atggagacaggacctgatggcaaagcacaaaaggtcaactactatttcattaattataag
acatttgtgaatgttgtcaaatataaattggatttgatgcgcaagcgtatggaaacagaa
gaacgtgatgccaccagtcgtgccagtttcaaatgcacaaactgcgataaaacatttacg
gatctcgaagccgatcaactctttgatttcacaacaggcgaattccgctgtacatactgc
ggcagtcctgtggaggaagacagttctgcgatgccaaagaaagactcgcgtttaatgctg
gcgcgatttaacgagcaattacaaccactttatgatctattacgggaagtggaaggcatt
aagttagcgccggaaatacttgaacccgaacctgttgatatcgacacaatacgaggcctg
aacaaacctctcaatcagcggcctgatggtcaacaatggtccggagaggcgacacgtaat
caaggttttgcagtcgaagaaacgcgtgttgatgttagtattggcggcgatgtacaggaa
gctgttaccgaacgtaaggcacgcccagtctggatgacagagagtacggttataacggaa
gacaatcatgatgccaccgatgccattttgaacgaagcggcacaatcatccacgcagcat
acgattagcgtgggtggttcaacaaataatcgcagcaaaaaggagaatgaagatattatg
tcggtgttgctacaacacgaaaagcaaaccaatcaaaaggattctccagcaaaaggactt
aaatatggatcgtcgaacgcagactctagtgattctagtgatgacgacaaggacatagat
aatatgaaaatacccaaagttgattacaataactttatcaattccgaatcagaagacgat
gatgacgatattcctacagtgcatgtttccggacgaccacatccaatcgatcaaatcaat
gatgaacttatagctcaaatgacgcagcaagaaaaagaaaactatatacacgtttatcaa
cagcactacagccatatttacgattaa
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