Rhagoletis zephyria (snowberry fruit fly): 108371687
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Entry
108371687 CDS
T08513
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108371687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108371687
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108371687
mRNA degradation factors
5'-3' decay
Lsm complex
108371687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
108371687
NCBI-ProteinID:
XP_017482781
LinkDB
All DBs
Position
Unknown
AA seq
118 aa
AA seq
DB search
MSHDLPASLLDELDKKLLVLLRDGRTLIGYLRSIDQFSNLLLHQTIERIYVKDKYGDIPR
GIFLIRGENVALCGEIDEIKEMNTPLKSVPIEDILELQQNEIDERKKGKFNAFQDADV
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacgatttaccggccagtttactggatgagctcgacaaaaagcttctcgtttta
cttcgtgatggccgaactctgattggatacttgcgcagcattgatcagttctccaattta
ctactacaccagaccattgaaaggatctatgtcaaggacaaatatggcgatattccaaga
ggaatcttcctcattagaggcgaaaatgttgctttgtgtggggaaatcgacgagatcaag
gagatgaacacaccactaaaatcagtgccaattgaagacatcctagaattacaacaaaat
gaaatcgatgagaggaaaaaaggaaagttcaacgcttttcaagatgctgacgtttaa
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