Rhagoletis zephyria (snowberry fruit fly): 108371877
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Entry
108371877 CDS
T08513
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rze02000
]
108371877
03037 Cilium and associated proteins [BR:
rze03037
]
108371877
Transporters [BR:
rze02000
]
Other transporters
Pores ion channels [TC:
1
]
108371877
Cilium and associated proteins [BR:
rze03037
]
Other cilia and associated proteins
Stereociliary proteins
108371877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
108371877
NCBI-ProteinID:
XP_017482979
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MSGYGMKNQIYVSDSSEDFDRIEVITTSTASSQSDLFTQLEGSQNLLTSIGNGQPLRIFA
ASASVANDDNKSKKSDCGGSRDGTDEQCGDESIELINNFGGHRHHLRPTSPLAVLSGSFS
RGATPTNMVRRWSQTLARFDRDKHSIREKTIYRMPSRKFFEVDGKLLSTNGLDAENEVEL
LAQEIEQHDGLMQDTALSHQHRLETLRALPQPLCVKRMLKQKLAITIEQHASEKQRCSWC
HFFTNAFIAFLFRSWKLVTFINHNLEIWYDELKTIEGHFGCNVSSFFNFLRWLLMLNVLV
LVCVFTFITFPQVLYNTIATEEMYLNETVLTGNYTGGDGEGESGLIMNVLTGEGYLQNSL
IFYSGYSNATFRLHPALNRYSLPHAYFMTMLVLYLLIFVVISTKMARVYRISFIQAAGSA
RGMLAPKTFCFWDFGISNRKAAELKHMAIFTEFKAVLNERTETKKNLTIWWRIWFICSRL
IAHVLVAAIIGCAGVAVWILLTRLDSTDTGWRTLSTAGILNLTMLLMQSVLSWISRMEDY
RSPRRTLHIALLRNFMLEAVIISVLVYFLLTKEYSQCWETHIGQELYRFVVMDTFICLFI
IPLICVTRAFLSSIYWPWLGGPEFDISQKSLGLVYNQTLLWLGLLFAPLLVAIIVCKMFL
KFYINKTLLLNLCKPSCNIWRSAQTQTLYLVFTFVSLLGVILTLGYIMTQLPMSAQCGPF
RESGYMFQIFIDGVLQLRHNQSLWRLLTLLIRPAAVGIMLVIMSALAYYLRAKSRARRLM
VKLLKEMIYLEAKDKEFLLNRIMNLTKKPDPSLCDGKSLGRVRKRAIQTAPTEIFVQNEI
SVLDRNATT
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggctacgggatgaaaaatcagatctatgtttccgacagcagcgaagatttcgat
cgtattgaggtgattactacgtcgacggcatcatcacaaagcgatttatttacgcaactc
gaaggtagccaaaatctgctcactagcattggaaatggtcaaccactcagaatattcgcc
gccagtgcatcagttgccaacgatgacaataaaagtaagaaaagcgattgtggcggcagt
cgcgatggcacagatgaacagtgtggcgatgagtccatagagttgataaataatttcggt
gggcatcgacatcacctgcgaccaacttcaccgctggcggtgctgtctggtagtttcagt
cgcggtgcaacaccaacaaatatggtgcgtcggtggtctcagactttggcacgcttcgat
cgagataaacatagtatacgagaaaaaactatatatcgcatgccctcgcgtaaatttttc
gaagtggatggaaaattgctctctactaatggtttggatgcggagaatgaagtcgaattg
ttagcacaggaaatcgaacagcacgatggcctaatgcaagacacagcactaagtcatcaa
catagactagaaacacttcgcgcgctgccgcagccactttgtgtgaaacgcatgcttaaa
caaaagttggccatcaccattgagcaacatgccagcgaaaagcaacgctgcagctggtgt
catttcttcaccaatgctttcatagcttttctatttaggagctggaagctcgtaacgttt
ataaatcataacttagaaatttggtatgatgaactgaagacaatcgagggtcactttggc
tgcaatgtcagctcctttttcaactttctgcgttggcttctaatgctgaatgtgttggta
ttggtatgcgttttcacgttcatcacatttccgcaagtactctataacacaatagcaact
gaggaaatgtatcttaatgaaacagtattaactggaaactatacgggtggtgatggggaa
ggtgaaagtgggcttatcatgaatgtacttactggtgagggatatctgcaaaactcgctc
atattttacagtgggtacagcaatgcaacatttcgtctacatcctgctctaaatcgttac
agtttaccacatgcgtattttatgacaatgttggtgctttacctgctaatttttgtcgtc
atttccactaaaatggcgcgtgtctaccgcataagttttattcaagccgctggcagtgct
agaggtatgctggcacctaaaaccttttgcttttgggattttggtatatcgaatagaaag
gcggctgaactaaaacacatggcaatttttaccgaatttaaagcggtacttaatgaaaga
actgaaaccaagaaaaatctaactatttggtggcgtatttggtttatttgctctcgtctt
atagcacatgtgctggtggctgctataataggctgtgctggagttgctgtgtggatattg
ttgacgcgactcgattcaactgacactggctggagaaccctctcaacggcgggtatacta
aatctaacaatgctgctaatgcaatccgttttatcatggatttcgagaatggaagattat
cgttcaccccgtcgtactctgcacatagccttgttgagaaatttcatgctggaggcggtt
attataagcgttttggtatactttcttctaacaaaagaatatagtcaatgctgggagact
catattggacaagaattgtatcgctttgttgtgatggacacattcatttgtttatttatt
ataccactcatttgtgttacgcgagctttcctgtccagcatttactggccttggctcggt
ggtcccgaatttgatatatctcaaaaaagtttgggtctcgtctataatcaaacattgctg
tggttggggttactattcgcaccattgcttgtggcgattattgtttgcaaaatgttccta
aaattctacatcaataagacgcttttattgaatctatgtaaaccatcctgcaatatctgg
cgctcagcacaaacacaaacgctttacctggtcttcacttttgtctctctgttgggcgtc
attttgacactgggctacattatgacgcagctacccatgagcgcgcagtgtggtccgttt
cgcgaatccggttatatgtttcaaatattcatagacggtgtactacagttgcgtcataat
caatcactatggcgccttcttacgttgctcatacgccctgctgctgtgggcataatgcta
gtcataatgagtgcgctggcttactatctacgcgccaagtcgcgtgcccgtcgtctgatg
gtaaagttactaaaagaaatgatatatctggaggcgaaagataaagaattcttacttaat
cgcattatgaatcttacgaaaaagccggatccttcgctatgtgatggaaaatcgcttggg
agagtgcgaaagcgtgcaattcaaacagctccaactgaaatttttgtacaaaacgaaatc
agcgtgcttgatcggaatgcgacaacttga
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