KEGG   Rhagoletis zephyria (snowberry fruit fly): 108372160
Entry
108372160         CDS       T08513                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03020  RNA polymerase
rze03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108372160
  09124 Replication and repair
   03420 Nucleotide excision repair
    108372160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rze03021]
    108372160
   03400 DNA repair and recombination proteins [BR:rze03400]
    108372160
Transcription machinery [BR:rze03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     108372160
DNA repair and recombination proteins [BR:rze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108372160
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 108372160
NCBI-ProteinID: XP_017483302
LinkDB
Position
Unknown
AA seq 275 aa
MPYANQPSVQITELTDDNVKFVLEDTELSVANSLRRVFIAETPTLAIDWVQLEANSTVLS
DEFLAHRIGLIPLISDEVVERLQYTRDCICLDFCPECSVEFTLDVKCTEEQTRHVTTADL
KSSNPKVLPVTSRHLNEEDNEYGESTDEILIIKLRRGQELKLRAYAKKGFGKEHAKWNPT
AGVCFEYDPDNAMRHTLYPKPDEWPKSEHTELEDDQYEAPYNWEAKPNKFFYNVESAGAL
KPENIVIMGVQVLKNKLSNLQTQLSHETQNDALAV
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccgtacgcaaatcagccatcagtgcaaataactgaattgacggacgataatgttaaa
tttgtgttggaagacacggaattgagtgtagccaatagcttacggcgtgttttcattgcc
gagaccccaacactagctatcgattgggtacaacttgaggcaaattctactgtgctatct
gatgagtttctggctcatcgcatcggactaattcctttaatatctgacgaagttgttgaa
cgtctacaatacactcgtgattgcatctgcttggacttttgtccagaatgcagcgtggag
ttcacacttgatgttaaatgcaccgaagagcaaactcggcatgttacaactgcagattta
aaatcaagcaacccgaaggtattgccggtaacgtcgcggcatctcaatgaagaagataat
gagtacggagaaagtacggatgagattttaattataaaattacgtcgaggacaggagctg
aagttgagagcttatgccaaaaagggctttggcaaggagcatgccaaatggaatccaact
gctggtgtatgttttgaatatgatccagataatgctatgcgccatacactctaccccaaa
ccagatgaatggccaaaaagtgaacacaccgagttggaagatgatcaatatgaggcacca
tataattgggaagcaaaaccgaataaatttttctataatgtagaatcagctggcgcactc
aagccggagaacatagttataatgggagttcaggttttaaaaaataagttatcaaatctt
caaacacaattgagtcatgagactcaaaatgatgccctagcggtataa

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