Rhagoletis zephyria (snowberry fruit fly): 108372305
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Entry
108372305 CDS
T08513
Name
(RefSeq) transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rze03000
]
108372305
Transcription factors [BR:
rze03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108372305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
DUF4636
Motif
Other DBs
NCBI-GeneID:
108372305
NCBI-ProteinID:
XP_017483454
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MTPPTPTSTPNSQTHHHNSTTTSLNSHQSSNNQNSHNSNSSANSKKESDRVKRPMNAFMV
WSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEVEKRPFIDEAKRLRAVHMKEHPDYKY
RPRRKTKTLMKKEKYPIGTGLGSLASDQSRSAAAAAAAVQQVSRDMYQMNGYMANGYPSM
MHEAYQQHAASYGTAASMAANGGLYGRYDMSQMTMPGGSMPMAYMNGSSNYSSMAPMSAS
AYSSMGSSASPMSGTGSSLSIKSESSGHSGNSPSTMAAAVAAAARSRPCNSELREMISMY
LPPGETDQSRLQMQNHYQSSGEHPMPLSHI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctccgacgcccacctcgactcccaactcgcagactcaccaccataacagcacc
accacttctctcaactcacaccagagcagtaacaatcaaaactcacataactccaacagc
tcggcaaacagcaagaaagagtcagacagagtgaagcggcccatgaatgctttcatggtc
tggagcagaggtcaaagacgtaaaatggctcaagaaaaccccaaaatgcacaattcggaa
atcagcaaacgcttaggagcagagtggaaactgctgtccgaagtggaaaagcggcctttt
atcgacgaagcaaaacgacttcgagcagtgcacatgaaggaacaccccgactacaagtac
cggcctaggcgaaagaccaagacactgatgaagaaggagaagtatccgataggcactgga
ctcggcagtctcgcctctgaccagagtcgatcagcggcggctgcggcagcggccgtgcaa
caagtgagccgagacatgtaccagatgaacgggtacatggccaatggctacccgagcatg
atgcacgaagcatatcaacaacatgccgccagctacggcactgccgcctcaatggccgcc
aacggcggtctctacgggcgctacgacatgtcgcagatgaccatgcccggcgggtcgatg
ccgatggcgtacatgaacggctcctcgaactactcctcaatggcgcccatgtccgcctct
gcctactcctcaatgggctcctccgccagtccgatgtctggcactggctcttcactgtcc
atcaagtcagagtcatcggggcacagcggcaactctccgagcaccatggcggccgcagtg
gccgctgcagcccgcagtcgtccttgcaatagcgaactgcgagaaatgatcagcatgtac
ctgccaccgggcgaaaccgaccagagtcgacttcaaatgcaaaaccactaccaaagctcc
ggtgaacatccaatgccactttcgcacatctag
DBGET
integrated database retrieval system
