Rhagoletis zephyria (snowberry fruit fly): 108372444
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Entry
108372444 CDS
T08513
Name
(RefSeq) muscle segmentation homeobox
KO
K09341
homeobox protein MSX
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rze03000
]
108372444
Transcription factors [BR:
rze03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
108372444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
HTH_NDX
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108372444
NCBI-ProteinID:
XP_017483624
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MLKLSSTGMTVTGLRTSMTSPTVPPQTASAAITTTMTLTSPSTIVVSPAHLISGNNNNSN
HNNNNSATNNFHRNGSNSSPTSPSTLLLTHQQHQTLQQQLLPLHTQSLHNHPHQLNKTSS
RLSNFSVASLLADTRPAATLSPTRTHSAEAMQTEPRNLSNNTPSVTLSPVSPAGSSPASP
TATAAQNGQALPPHAPQHPHPHPHAHFHPAAVAHHAHLLHAAAAAHAQQQHAAAVAAAAA
AQQAAVAAAANAGASQHLHSSSAHLRHTLSGSSTEAATNLVTTEGGNNSQQQQQHSSARL
GSPAAHASGNSIETSSSSSATVLLAKHERHSPIGSSVDSELEYDDEYNEHDHDGEHEHDE
EEDSIVDIEDMNADDSPRSTPDGMDSSKSPEALSSHMANSPHLLSPAALAASGHVPIRPT
PFSALAAAAVAWGGIGAGVPWPGARQMPPFGPPGLFPGQGFGGGDNNEPPRIKCNLRKHK
PNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAKAKRL
QEAEIEKIKMAALGRGGPGAQWAMAGYFHPSLMHLG
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagctgtcatccacaggaatgactgtcactggtttacgcacaagcatgacaagc
ccgacggtgccgccacaaaccgcatctgccgccatcaccaccaccatgaccctgaccagc
cccagtacgattgtcgtcagtcccgcacaccttattagcggcaataataacaactccaat
cacaataacaacaacagcgctaccaacaactttcaccgcaacggcagtaatagcagcccc
acatcaccttccacgctcctgcttacgcatcagcaacaccaaactctgcagcagcaattg
ttgccactgcatacgcaatcgctgcacaatcacccgcatcagttgaataaaaccagctcg
cgtttaagcaatttcagcgtcgcttccctcctggccgatacgcgaccagcggcaacgcta
tcgccaacgcgcacccacagcgcggaagccatgcaaacggagccgcgtaatttgtccaat
aacacaccatctgtcactttatcacctgtttcgcctgccggttcctcacccgcctcaccg
accgccaccgccgcacaaaacggccaggcgctcccaccacacgcgcctcagcatccacat
ccacatccccacgctcattttcatcctgcagccgttgcacatcatgcacatttgttgcat
gccgccgcagccgcacacgcgcagcaacaacacgccgccgcggtggcagccgctgctgct
gcgcaacaagctgcagtagcggcggcggcaaatgcgggtgcgtcccaacatttgcacagc
tcctcagcgcatttacgtcacacattaagcggcagctcaacggaagcggccaccaatcta
gttaccacggaaggtggcaacaattcgcaacaacaacagcagcattcttcagcgcgtctt
ggttcaccagccgcgcatgcaagcggcaacagcatcgagacatcgtcctcgtcatcggca
acggtgttgctggccaaacatgaacgtcactcgcccatcggtagttcggtggactctgag
ctggagtatgatgatgagtacaatgaacatgaccatgatggagagcatgaacatgatgag
gaagaggattcgattgtggacattgaagatatgaatgccgacgattcgccgcgttcaacg
ccagacggtatggatagcagcaaatcaccggaggcgctaagcagtcacatggctaactca
ccgcatctactctcgccggcggcgctggcggcttcgggtcatgtacccatcagaccgaca
ccgttcagcgcgctggcagcggcggcggtggcgtggggcggcattggcgctggagtgccg
tggccgggtgcgcgtcaaatgccaccattcgggccgcctgggctgtttccaggacaagga
ttcggcggaggtgacaacaacgaaccgccacgcatcaaatgtaatctgcgcaaacataaa
ccaaatcgcaaaccccgcacacctttcaccactcaacagctactctcactggagaagaaa
ttccgcgaaaaacaatatctgagcatagcggagcgtgctgaattctcctcatctctgcgg
ctaaccgaaacccaagtgaaaatttggtttcaaaatcgacgcgccaaagcgaaacggctg
caagaagcggaaatagagaaaatcaaaatggctgcactgggacgtggcggaccgggcgcg
caatgggcgatggccggctactttcatccgagtctaatgcatttgggataa
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