Rhagoletis zephyria (snowberry fruit fly): 108372636
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Entry
108372636 CDS
T08513
Name
(RefSeq) brahma-associated protein of 60 kDa isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108372636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108372636
03036 Chromosome and associated proteins [BR:
rze03036
]
108372636
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108372636
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108372636
PBAF complex
108372636
GBAF(ncBAF) complex
108372636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
108372636
NCBI-ProteinID:
XP_017483854
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MSQRFAPGQPGSAPVSGTPRYQPPPPQTAGMRPYAAGGTFPQRGFPLHQNAAQSGQSNTS
SPGGPPLHQRTSQPSFQSGLRGSASGGGSKRSTESRNISSNQNKGDFGAAKKKKKLADKI
LPQKVRDLVPESQAYMDLLTFERKLDATIMRKRLDIQEALKRPMKQKRKLRIFISNTFYP
SKEPTNDGDEGSVASWELRVEGRLLEDGKGDPTTKIKRKFSSFFKSLVIELDKELYGPDN
HLVEWHRTHTTQETDGFQVKRPGDRNVRCTILLLLDYQPLQFKLDPRLARLLGVHTQTRP
VIISALWQYIKTHKLQDAHEREYINCDKYLEQIFGCQRMKFAEIPQRLNPLLHPPDPIVI
NHFIESGAENKQTACYDIDVEVDDTLKNQMNNFLMSTASQQEIQGLDTKIHETVDTINQM
KTNREFFLSFAKDPQKFIHRWIVSQTRDLKAMTDVVGNPEEERRAEFYYQPWTHEAVSRY
FFTKVNQKRAELEQALGIRNG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaggtttgctcctggccagccaggatcagctccagtgtcgggcacaccacga
tatcagccacctccgcctcaaacagcgggtatgcggccctatgccgctggtggcactttt
ccgcaacgtggctttcctctccatcaaaatgctgctcaatctggacaaagtaatacaagt
tctccaggtggaccgcccttacatcaacgaacttcacaacctagttttcaaagtggtcta
agaggaagcgcctctggtggtggaagtaaaaggtcaactgaatctcgtaatattagtagc
aaccaaaacaaaggggattttggtgcggcaaagaaaaagaaaaaactcgctgacaaaata
ttaccccaaaaagttcgagatttggtgcctgagtcccaagcatatatggatttattaaca
tttgaaagaaaattggatgcgacgatcatgcggaagcgtctggatattcaagaagcattg
aaaaggcccatgaagcaaaaaagaaaacttcgcatctttatttcaaacacgttttatcca
agtaaagagccgaccaatgacggagatgaaggttccgtagcctcctgggagctccgcgtc
gaaggtcgtttgttggaggacgggaaaggagatcctactacaaaaataaaaagaaaattt
tcttctttttttaagtcattggttattgaattggataaagagttgtatggtcctgacaac
cacttagttgagtggcatcgaacgcatactacgcaagaaactgatggatttcaagtaaag
cgtcctggtgatagaaacgttcgttgcacaatactactattgttggattatcaaccattg
caatttaaattagatccccgactagcacgtctacttggtgttcatactcagacacgccca
gtgataatttccgcactctggcaatatataaaaactcataaactacaagatgctcatgaa
cgtgaatatataaattgtgacaagtatttggagcagatatttgggtgccagcgaatgaag
ttcgcggagataccacaacgtctcaacccgctacttcaccccccagatccaattgtcatc
aaccattttattgaaagtggtgccgaaaataagcaaactgcatgctatgacattgacgtt
gaagttgacgacacgcttaaaaaccagatgaataattttctaatgagtacagccagtcaa
caagaaattcaaggtttggatacgaaaattcatgaaactgtcgataccattaaccagatg
aaaactaaccgcgagttctttttgagttttgcaaaagatccgcaaaagtttattcatcgt
tggattgtaagccaaacaagagatttgaaagcgatgacagatgtggttggaaatcctgag
gaagagcggcgagctgaattctattaccaaccgtggactcatgaagcagtctcacgttac
ttctttacaaaagtaaatcagaaacgcgctgaattggaacaagccttgggcatacgtaat
ggctaa
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