Rhagoletis zephyria (snowberry fruit fly): 108372663
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Entry
108372663 CDS
T08513
Name
(RefSeq) cullin-4B-like
KO
K10609
cullin 4
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03420
Nucleotide excision repair
rze04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108372663
09124 Replication and repair
03420 Nucleotide excision repair
108372663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rze04121
]
108372663
03400 DNA repair and recombination proteins [BR:
rze03400
]
108372663
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rze04147
]
108372663
Ubiquitin system [BR:
rze04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
108372663
DNA repair and recombination proteins [BR:
rze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
108372663
TCR (transcription coupled repair) factors
Cul4-CSA complex
108372663
Exosome [BR:
rze04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108372663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
DUF2018
Motif
Other DBs
NCBI-GeneID:
108372663
NCBI-ProteinID:
XP_017483884
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MNNDRMSFLQNATTNTCDNTNLLEAKNNIDRTQLTKCNVSKKLVIKNFVKPQLSGDFLPQ
TWEKLREAVISIQNSKPAGTSLEELYQAVQNLCSNQMASTVYMKLRELTDNHVSTVVLQF
LHPNYDNLTFLKMTEKCWENFCNQMIMIRCIFLYLDRTYVLQHAQISSIWDMGVEIFREQ
VIFNNSVKLKITESILDIISKERNGEKIDRMLLKNILRMLTDLAIYNDLFETKFLKESQQ
FYHMEGEKNIQEMSIAGYLCYIDRRMNEENERLASYLDHSTSKRLIHIVERELIQLHMET
IFKTNFDKLFSESDHELLKLAYNLLTRVPEGTNKLCSQFNSFIKNQGKQIVISTEEKDKT
MVQELLDFKDKVDEIAIKCFGRNEKFINSLKEAFEYFINQRTNKPAELIAKFVDIKLRSG
NKETTEEEFEKLLDKVMVIFRFIHGKDIFEAFYKKDLAKRLLVGKSASVDAEKSMLLKLK
QECGSGFTSKLEGMFKDMELSRELMPTFKQFLLNTNPSATVDMSVSILTTGYWPTYHPVE
IIMPSELLQYEVDFNRFYTSKHGGRKLQWQRNLGNFVLKATFNSGVKELQVSFFQGLVLL
LFNSTNELSLSEIRNQISDPKKALDEPELRRTLQSLACGKARVLIKNPKGRDINDHDKFT
FCGEFTNKLFRIKINQIQMKETKEENTNTQERVFQDRQYQIDAAVVRIMKMRKKLQHNLL
LSEIFKQIKFPATPAEMKKRIESLIERDYVQRDKDQPNLYHYVA
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgatcgaatgtcgtttctgcagaatgccaccacgaacacctgtgataatact
aaccttttagaagctaaaaacaacatcgaccgaacccagttaaccaagtgcaatgtttcg
aagaaattggtcatcaagaatttcgtcaagccccaactttccggagattttctgcctcaa
acatgggagaaacttcgagaggctgtcatttcaattcaaaactccaaaccggccggcact
tcactcgaagaactgtatcaagcggtccagaatttgtgctcaaaccaaatggcatcgacg
gtctacatgaagcttagagaattaacggataatcatgtgtcaactgtggttctgcagttt
ctccacccaaactacgataatctcactttccttaaaatgactgaaaagtgctgggagaat
ttctgcaatcaaatgattatgatccgttgcattttcctttacctggacagaacatatgtc
cttcaacacgctcagatttcttccatttgggacatgggagtagaaattttccgcgagcaa
gtgatatttaataatagtgttaagctcaaaatcaccgaatctatactagacatcatctcc
aaagaacgaaatggcgaaaaaattgatcgaatgcttttaaagaacattctccgcatgctg
actgatctggcaatttacaacgacttgtttgaaacaaagttcctgaaagagtcacaacag
ttttatcacatggaaggcgaaaagaatatccaagaaatgagtattgccggttacctctgc
tacattgatagacgaatgaatgaagaaaatgaacggcttgcttcctacctggatcactcg
acatcaaagagacttattcacatcgtcgaacgagaactgattcaactgcacatggagaca
atattcaaaaccaacttcgataagcttttttcagagagcgatcacgagttgctgaagcta
gcttataatctgcttacccgagttcccgaaggaacaaataaactgtgcagccagttcaat
agcttcatcaaaaatcagggaaagcaaattgtaatttcaactgaagaaaaggacaaaacc
atggttcaagaactgctggactttaaagacaaggtggacgagatagccatcaagtgcttc
ggccgtaatgaaaagtttatcaactcactaaaggaagcttttgagtatttcatcaatcaa
cgcacaaataagcccgctgaactgatcgccaagttcgtagacattaaattgcgctcaggc
aataaggagacaaccgaagaggagtttgagaagctgctcgacaaggtgatggtcatcttt
cgcttcattcacggcaaagacatctttgaggcattctacaagaaggaccttgccaagcgt
cttttagtcggaaagtctgcatcggttgatgctgaaaagtcgatgttacttaagctgaag
caagaatgcggcagtggtttcacctctaaattggaaggaatgttcaaagatatggagctg
tcgcgtgagctcatgcctacctttaagcagtttttactcaacaccaacccaagtgccact
gtcgacatgtctgtcagcattctgaccactggttattggccgacttatcacccggtggag
ataatcatgcccagcgagttgcttcagtacgaagtggactttaacaggttctacacctcc
aagcacggaggccgaaagcttcaatggcagcgaaacctaggcaactttgtcctgaaggca
acgttcaattcgggcgtcaaagagctacaagtctcctttttccaaggccttgtactctta
ctcttcaacagcacaaatgagctaagtcttagcgaaattcgaaatcaaatttccgatcct
aagaaggcgctagatgaacctgagcttcgaagaacactgcagtctcttgcttgtggaaaa
gctcgagtcctgataaagaatccaaaaggtcgcgacataaatgaccatgataagttcact
ttttgcggcgagttcaccaataaactgttcaggataaagatcaaccaaattcagatgaag
gaaacaaaagaggaaaatacaaacacccaagagcgagtttttcaagatcgtcagtatcaa
attgacgctgctgtggtccgcatcatgaaaatgagaaaaaagttgcagcataatttgctt
ctttcggagatctttaagcaaattaaatttcctgcaacgcccgccgaaatgaagaaacgg
attgaaagtctgatcgagagagattatgtgcagcgggacaaagaccagcctaatctgtac
cattatgtggcttag
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integrated database retrieval system
