Rhagoletis zephyria (snowberry fruit fly): 108372752
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Entry
108372752 CDS
T08513
Name
(RefSeq) regulator of gene activity isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108372752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108372752
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108372752
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108372752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
108372752
NCBI-ProteinID:
XP_017484005
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MANLNFQQPPRSLANASMTGRTTGGFGGSSLSGHVTPTSGMFPTGGANYGQTQQPQLSPN
RNAQLSVGGPALSRGGRANIFGQQTFERRAMQALGGGPMSNMGSFMQSGRGGYGTGGGAS
GFPNVFGGSGDAATPALLDPTEFPSLTNVRGQNDQSLPQTNPLQPPGSKPYGNFFTSFGM
VKQPTSEQSEFTMSNEDFPALPGTQISDGTTNSGITENNLDGAEKAMNSIVGGSGLGAVG
SGVGVSGSSGGGSSGRGIDHQHDNSSNDKLVKSGVQTSPDGKVTNIPASMVNNQFGMVGL
LTFIRAAESDPNLVTLALGNDLTGLGLNLNSQESLHPTFAGPFADHPCRVQDVECNVPTE
YLINYAIKDKLSAPLLNKLQEDLLFFLFYTNIGDIWQMMAAAELYGRDWRFHIEEKIWIT
RIPGNNQGKFYYFDAQSWKRMSKDFQIDAEKLDKCPNISALVNMNGQSV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttgaattttcaacaacctccgagaagtttagcaaacgcgtcaatgacgggg
cgaactacaggtgggtttggtggtagttcactctccgggcatgtaacacctacgtctggc
atgtttccaacgggcggtgcgaattatggacaaacgcaacaacctcaactctcaccgaat
cgcaatgcacaattgtcggtgggcggtccggcgttatcgagaggtggtcgcgcgaatatc
tttggtcaacaaacgttcgaacgacgagcaatgcaggcgttaggtggcggccctatgtcg
aatatgggcagctttatgcaatcgggtcgcggtggctatggtactggaggtggtgcaagt
gggtttcccaatgtgtttggtggcagtggagatgcggcaacgcccgcgctactcgaccca
acggaatttccatcgttgacgaatgtgcgtggccagaatgatcaatcactgcctcagacg
aatcccctccagccaccgggaagcaaaccttatggtaatttttttacctctttcggcatg
gtgaaacaaccaacgtcggaacaatcggaattcaccatgtcgaatgaagatttccctgcg
ttaccgggcactcaaatctccgacggtacaacgaattcgggcatcacggagaacaatttg
gacggtgcggagaaggcgatgaactcaattgtgggcggcagtgggttaggtgccgttggg
agtggcgttggcgttagcggtagtagtggtggcggcagtagtggtagaggaatcgaccat
cagcacgataattccagcaatgataaacttgtgaaaagcggagtgcaaacttcacctgat
ggcaaggtcacaaacatcccagcgagtatggtgaataaccaattcggcatggtgggtctc
cttacattcatacgagcggcggaatcggatccgaatttggtgacgttagcgttaggaaat
gatcttaccggcctcggtctgaatttgaattcacaggaaagtttacatcctacgttcgcc
ggaccgtttgcggatcacccctgcagagtacaagacgttgaatgcaacgtgccaaccgaa
tatctgatcaattatgcgataaaggataaactttctgcaccgttactaaataagctgcaa
gaagatctgctttttttcttgttttacacgaatatcggcgacatttggcaaatgatggcc
gcagcggaactttatggccgcgattggagatttcacatagaagagaaaatatggattact
cgaattcctggtaataatcaaggaaaattctactacttcgatgcgcaaagttggaaacgt
atgtccaaggatttccaaatcgacgccgagaaattagataaatgtcccaatatatctgcg
ttagtgaacatgaatggacagtctgtataa
DBGET
integrated database retrieval system
