Rhagoletis zephyria (snowberry fruit fly): 108372842
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Entry
108372842 CDS
T08513
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108372842
Membrane trafficking [BR:
rze04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108372842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
Motif
Other DBs
NCBI-GeneID:
108372842
NCBI-ProteinID:
XP_017484116
LinkDB
All DBs
Position
Unknown
AA seq
1672 aa
AA seq
DB search
MEEKRIADYFVVAGMPEHPQLLQENIFSESGHLRAANTIEPITDIGVYFPLLDEEVPDGY
EVLETTPTGLPANLNHGSMRTTECYIYYRRGKDRPPLVDIGVLYDGHERIMSDAEIVTET
PGGRIANVNNSSSKIFLTYRRARPDMPCNELVVTDLCVIVQSKGEKPPHAFCLIYKTLNK
GYMGSDVYLCYKKSMYRPRLISYQPEILLRYPTVDHNDFPLNLCPSVPLFCLPMGASLEA
WPHVSDGEKRKPISPVFSTFVLTVNDGSYKVYGSALTFYEDFEESELTAKQRELLCWDEA
FANHNSLHIIKSICLLSHYPFGDTFDRWLRYLQRLAVRGVDLPVPIERYITQLLDEVPFP
APSIHLQLSSESNDRILLTQPEDSPLPRSGAGFHMLLQNLGTDNCLHVLLLALTEQKLLI
HSLRPATLTAVGEAIVSLLFPFKWQCPYIPLCPLGLAEVLHAPLPYLIGVDSRFFDLYEP
PQDVTCIDLDTNTISLCESQRHLTIKLLPKRAARFLRQSLNELEGLKTTHIESTNSLDRD
LRKRKREQDLEQRIQEAFLLFMASILRGYRDYLTPISKAPSVGATDPSALFQLKAFLRSR
DKAHQKFFELLMKTQMFIRFIEERSFVSDGDHGLTFFDECAEKVGAYDDTPSDLRLVDWE
SGQNSERTKYIFPPDSVGPKQVDNSGVVYNYAKFTLNPSLLKSSKKTALTNFLQQQLNGS
LAPGSPIARRTKHEIKLSHKMARRCQMHPEAWSKYLLATCYSLYFLILPSMVNDTHQAGK
EHDILRAAYNMLVRASKLKITCDEFCYRIMMQLCGIHNLPVLAVRLHYLMKRSGVQPNAL
TYGFYNRCVLESEWPSDSTTLSQLRWNRIKNVVLGAAHFRRAGKRYAAKKPLSASCENNL
STLETVDGTSRTSLDSSTSSHMDRGAGDAHTYGANLLDFSAFDKLRGKLGSIVRQSAMAV
SAQDPGGDVISSTAGLLISGDSKSNGGGEKSGSEKGAPPTSTSSPHTPNSPHSPSCDLTA
VGAGGKLQLAKTESFGGDAQLLNKLQRKQSLPTETIGHRYKIMNIGDGEDDTADEEALKE
DEIEQEIASSQEELDYVVAGSDINSAHAQAHLLQSPTKISPRTPVTQNDPLGALNEELQD
QSTPTNTVHTKETASEQHGESNNSTMFTDKPILFKGQRSATFDESTQLNKSMQRSETMPG
SSVASSLANFGSSLKFNFGRYSPARFSFKKDSFKPTIIIENISNISPSLTGKKSNEIIQG
SLSSIKYAANSLTRKFDEIKGALSAQTTPVKTPGSVGNTETGDEDVITHEDGMLKMRRVS
SDLDPWGRLSESRKSSYNNLVPLGENTSALNLSAFPVLPENLYSPIADLEERPECDVLIQ
ITSCSQCHNCSVLLYDEDIMSGWSAEDSNLNTTCHACYKLTVPFLSVQIVVDDSFKALKQ
SDSLTIPYLNPLVLRKELENILTQEGDIALVKPSFVEEHPIIYWNLLWIMERIESKTHLP
ELCLPVAPDEECDPLSKVKTVNIQCLWDNLRLHSEAGPPMYILYKQNQPASPLLKALLTD
QAHLNKNVIQQIISSIRCNDLSTPIKRLANERHKLKNNGVDRTHSIYRDILFLALTAIGR
SNVDLATFHREYAAVFDKLTEKECKMFYRNQDLPPSAARIFCRAYFKPLLLP
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaaacgaattgctgattattttgtagtagctggtatgccagaacatccgcag
ttgttacaggaaaacatttttagtgaatcgggtcatttgagagcagctaacaccatagag
ccaatcacagatattggtgtatactttcccttgcttgatgaagaagtgcccgacggctat
gaagtactggagacaacaccaacaggactgccagcgaatcttaaccatggctcaatgcgc
acaacggaatgttacatttattataggcgtggtaaagatcgaccgcctttggtagatata
ggtgttttatacgatggccatgagcgcataatgtcggatgccgagatagtcacagagacg
cctggtggtcgcatagcaaatgttaacaattcttcttcgaaaatttttcttacgtaccgt
cgagcacgacctgatatgccctgcaatgagctcgtcgtcactgatttatgtgttatcgtg
caaagcaaaggagaaaagccgccgcacgcattttgccttatttataaaacgcttaataag
ggttacatgggaagcgatgtatatttatgctacaaaaaatcgatgtaccgtccaagattg
atcagttaccagccagaaatactattgcggtatccaacagtagatcacaatgatttcccc
ttaaatttatgccccagtgtgccgctattttgcctgccgatgggtgcttctttagaggcc
tggccgcatgtaagcgatggagagaaacgaaaacctatcagtccagtgtttagtactttt
gtgctgactgtcaatgacggttcttataaagtatatggttctgcgctaacattctatgag
gattttgaggaaagtgaattgactgcaaaacagcgtgaattactgtgctgggatgaagcg
tttgcaaaccataattcattgcatataattaaatctatatgccttttatcgcactatcca
ttcggagatactttcgaccgatggctgcgttacctgcaacgcttagcagtgcgtggtgta
gatttacctgttcccatcgaacgctatataactcagttgctcgatgaagtaccgtttcca
gcgcctagcatacacttacaactctctagcgagtccaatgaccggattctgcttacgcaa
ccagaagactcgcctttgccacgtagcggtgctggtttccacatgttgctacagaatttg
ggtactgataattgtttacatgtcttgctgctggcgttaacggagcaaaaactcttgata
cattcattacgacctgctacgttaactgcagttggagaagctattgtatcgctgttattt
ccctttaaatggcagtgtccgtacattccactatgcccactaggcttggcggaagtctta
cacgcgcctttgccctatttgattggagttgattcccgattctttgatttgtacgagcct
ccgcaagatgttacttgcattgacttggatacaaacacaatcagcttgtgtgaatcacaa
aggcatttaacgataaaactgttgccaaaacgtgctgcgcgtttcttgcgacaaagtctt
aatgaattggaaggtctgaaaactacacacatcgaatcaacaaacagccttgatagggat
cttagaaagcgaaaacgcgagcaagatctcgaacaacgaattcaagaggcctttttactg
tttatggcatcaattttacgcggttatcgcgattatttgacgcctatatcgaaggcgccc
tctgttggcgccacagatccgagtgccttatttcaactgaaggccttcttgcgatcgcgc
gataaggcgcatcagaaattttttgagcttctcatgaaaactcaaatgtttatacgtttt
attgaagaacgttcttttgtatcggatggtgatcatgggcttacatttttcgatgaatgt
gccgagaaggtgggcgcatatgatgacacaccgtccgacttgcgtttagttgattgggaa
tctgggcagaatagcgaacgtaccaagtacatattcccacctgacagtgtagggcccaaa
caagtagataattctggcgtggtttataactatgcaaaattcacactaaatccaagtctt
ttgaagtcgtcgaagaagactgcgctgacgaactttttgcagcagcagttaaatggctct
ctagcgcctggatcgccgatagcccgccgcacaaaacatgaaattaaactctcgcataag
atggcacgtcgatgtcagatgcatcccgaagcatggtccaaatatctgctagcgacttgt
tattcgctttatttcctcatactcccgtccatggtaaacgacacgcatcaagcgggaaaa
gagcatgacattttgcgcgccgcgtataacatgctggtgcgcgcctccaaacttaaaatc
acctgtgatgaattttgttaccgtatcatgatgcaattgtgtgggatacataatttaccc
gtgctggcagtgcgtcttcattatctcatgaaacgttcgggtgtacagcccaatgcactc
acatacggcttctacaatcgctgcgtactcgagtcggaatggcccagtgatagcacgacg
cttagccagttacgttggaatcgcattaaaaatgttgtacttggtgcagcgcattttaga
cgcgcgggtaaaagatatgcagctaagaaaccactttcagcttcatgcgaaaataacctc
agcacattagaaacagttgatggcacgtcgcgcaccagcctcgattcatcaacgtcttcg
catatggatcgaggcgctggtgatgctcacacatacggcgcgaacctgctggatttttca
gcattcgacaaactgcgtggcaaattgggaagcattgtgcggcaatcagcgatggcagta
agtgcacaagatcctggtggcgatgttattagttccactgcgggacttctgatatctggg
gacagcaagtccaacggaggcggcgaaaaatcggggagcgaaaaaggcgccccacctaca
tccacatcttcgccacacacacccaatagtccacacagtcccagctgtgatctgaccgct
gttggcgcaggtggtaaactacaattagcgaagacagagagtttcggaggtgatgcgcaa
ctgctgaataaattacaacgcaaacaatcgctgcctaccgaaacaattggacatcgatat
aaaataatgaatattggcgatggggaagatgacacagccgatgaagaggcgttaaaagaa
gatgaaatagagcaagaaattgccagttcacaggaggagttggactatgtggtggcgggg
tcagacataaattcagcgcatgcccaagcgcaccttttgcagagccccacgaaaatatcg
ccacgtacaccggtaacacaaaatgatcctctaggtgctctaaacgaggagcttcaagat
caaagtacgcctacaaataccgtacacaccaaagagacagcaagcgagcaacacggcgaa
tcaaataatagcaccatgtttaccgataaaccaattttattcaaaggacaacgaagtgca
accttcgacgaatccacccaattgaacaaaagtatgcaacggtcagaaacaatgcctgga
tccagtgtggcatcgagcttagccaattttggctcgtctttgaaattcaatttcggacgt
tattcacctgcacgattctcatttaagaaagacagtttcaagcccaccattattatagaa
aatatttccaatataagtcccagtttaacgggtaaaaaatcgaatgagatcattcaaggt
agcctgagtagcataaaatatgcggctaattcgctgactcgaaaatttgatgagattaaa
ggcgcgctctcagcccaaacgacaccggtgaaaacacccggcagtgttgggaatactgag
actggtgatgaggatgtaattacccacgaagatggcatgctgaaaatgcgccgcgtctcc
agtgacttggatccatggggacgtctgagtgaatcgcgcaagtcaagctacaataattta
gtaccgttgggtgaaaatacctcggctttgaatttgagcgcatttcccgtgctgccggaa
aatttgtactcacccatagcggatttagaggagcgtcccgagtgtgatgtactcatacaa
attacctcctgttcgcaatgccacaactgttcggtgctgttgtatgatgaggacattatg
tccggttggtcagcggaggactctaacttgaatacaacctgccacgcatgctataaatta
accgtgccattcctgagcgtacaaattgtggtcgatgattccttcaaggcgctcaaacaa
tcagacagcctgacaattccctatctaaatccgttggttttgcggaaagagctcgagaac
atacttactcaggaaggtgatattgcgctagtaaaaccttcgtttgtggaggaacatccc
attatttactggaatttactatggatcatggagcgcatagagagtaaaactcatctgcct
gagctttgtctaccagtggcgcctgacgaggaatgtgacccactcagcaaagtaaaaact
gtgaacatccaatgtctatgggataatttacgattgcacagtgaagccggaccacccatg
tacattttgtacaaacaaaatcagccagccagtccacttctaaaggcgttgcttaccgac
caagcgcatttgaacaagaacgttattcaacaaatcatttcgtcaatacgctgcaatgac
ctctcaacgcccatcaaacgtttggctaatgaacggcacaagttaaaaaataacggcgtc
gatcgaacacactccatctaccgcgatatactctttctggcgcttacggccatcggtcgt
tccaatgtcgatttggccacattccatcgcgaatatgccgcggtctttgacaagctgacc
gaaaaagaatgtaaaatgttctatcgtaatcaggatttacctccctcagcagcaagaatt
ttctgtcgagcttattttaaaccgttattacttccttga
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