KEGG   Rhagoletis zephyria (snowberry fruit fly): 108373214
Entry
108373214         CDS       T08513                                 
Name
(RefSeq) splicing factor U2AF 50 kDa subunit-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108373214
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rze03041]
    108373214
Spliceosome [BR:rze03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108373214
 Complex B
    108373214
SSDB
Motif
Pfam: RRM_1 RRM_MUD2_C DUF8489 RRM_7 RRM_9
Other DBs
NCBI-GeneID: 108373214
NCBI-ProteinID: XP_017484563
LinkDB
Position
Unknown
AA seq 362 aa
MQYKQMQASGQIPAALLTAPGVAPVPIGSTITRQARRLYVGNIPFGCSEEEMMDYFNSQM
HSCGFSQALGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGIAFKGQSLKIRRPHDYQ
PMPGMTENPASIVPGVVSTVVGDSPYKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKD
SATGLSKGYAFCEYQDSTITDQAIDGLNGMQLGDKRLIVQRASVGAKAGQLGMMNTAMMS
GPVAIQVPGLQISQMTTAIGNPTEVLCLMNMVTPEELVDDEEYEDILEDIREECAKYGVV
RSLEIPRPIEGVEVPGLGKVFIEFTNNNDCQQAQQSLAGRKFANRVVVTSYFDLDRYHRR
EF
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgcagtacaagcagatgcaggccagtggtcagataccagcggcccttttgaccgctcca
ggcgtcgccccggtaccaattggctcaaccatcaccagacaggcccgccgactttacgtc
ggcaacattccctttggctgcagcgaagaggagatgatggactacttcaactcgcagatg
cactcctgcggcttcagtcaagctctcggcaatccggtgctcgcttgtcagattaacctt
gacaagaactttgccttccttgaatttcgctccattgacgagacgacgcaggccatggcc
tttgatggcattgctttcaaaggacagtcgctgaaaattcgccgacctcatgactaccag
ccaatgcctggcatgacggagaacccagcgtcaattgtaccgggtgtcgtcagcacagtt
gtgggcgattcgccatacaaaatatttattggcggtcttcccaattacctcaatgaagat
caggtcaaagaactactaatgagttttggtcaattgcgggcatttaacctcgtcaaagac
agtgccactggtctcagtaaaggctacgccttctgcgagtaccaggactcgacaataact
gatcaggcaattgatggcctaaatggcatgcagttaggcgacaagcgattaatagttcaa
cgggcgtcagtgggtgccaaggcgggtcagctgggcatgatgaacactgcaatgatgtct
ggtccggtagcgattcaagtgccaggactgcaaatcagccaaatgaccactgccattggc
aatcccactgaggtgctctgtcttatgaatatggtcacaccggaggagctggttgacgat
gaagagtacgaagatattctcgaggacattcgcgaggagtgcgcaaagtatggtgtagtt
cgctctcttgaaattccacggcctattgaaggcgtggaagtgcctggacttggaaaagtt
ttcattgagttcacaaacaataacgactgccagcaagctcagcaaagcttagcaggacga
aagtttgcgaatcgcgttgtcgtcacatcatattttgaccttgatcgataccatagacga
gagttttag

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