KEGG   Rhagoletis zephyria (snowberry fruit fly): 108373291
Entry
108373291         CDS       T08513                                 
Name
(RefSeq) transcription elongation factor B polypeptide 2
  KO
K03873  elongin-B
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rze00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108373291
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rze04121]
    108373291
   03400 DNA repair and recombination proteins [BR:rze03400]
    108373291
Ubiquitin system [BR:rze04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     108373291
   Cul5 complex
     108373291
DNA repair and recombination proteins [BR:rze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108373291
SSDB
Motif
Pfam: ubiquitin Rad60-SLD GABP-alpha Ribosomal_S13_N Ubiquitin_2
Other DBs
NCBI-GeneID: 108373291
NCBI-ProteinID: XP_017484645
LinkDB
Position
Unknown
AA seq 118 aa
MDVFLMIRRHKTTIFTDAKENTTVAELKRMIEGILKVRPHEQKLYNQDNEVMEDDNTLQD
YGIQMSTAKAQAPAQLGLALRDEHGDFEPLEITPYSSPPDLPEVMKNQEAANGQEQVA
NT seq 357 nt   +upstreamnt  +downstreamnt
atggatgtattccttatgattcgaagacataaaaccacaatttttaccgatgccaaggag
aacacaaccgtcgcagaactaaagcgtatgatcgaaggcatcctaaaagtgcgtccacac
gaacagaaactgtacaatcaagacaacgaagtgatggaagacgacaacactcttcaagat
tacggcattcagatgtctacagcaaaggcgcaagccccggcacagttaggactagcacta
agagacgaacatggagatttcgagccgctcgaaattacgccgtactcatcgccaccagat
ctacctgaagttatgaaaaatcaagaggcagctaacgggcaagaacaagttgcataa

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