Rhagoletis zephyria (snowberry fruit fly): 108373325
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Entry
108373325 CDS
T08513
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rze03041
]
108373325
Spliceosome [BR:
rze03041
]
Common components
Common spliceosomal components
General mRNP proteins
108373325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
108373325
NCBI-ProteinID:
XP_017484684
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MAEDFDVEAMLEAPVDFGKKDSGLGSLNGGDTSPSTTHQEKNGTKEYSSERDKERKRHKR
RSRSRSRDRKKRSKRSRSREKRRRGERGEKGGNRSSSRSPRSRSRSHSRSQSPLPAAAAA
RNRSRSRSRSRDRAVESRSGRRSRRSNSRDRRDDRGRRQQRSLSRDRYDRRDLYGGGRRG
GGGGGGGGYYDRRSPTPREDLPIEERDQRTVFCMQLAARVRQRDIEEFFSKVGRVREVRL
IMDNRTRRHKGIAYVEFKAIDSVGKAIAMTGTRLCGVPIVVQHSQAEKNRLAAANASTKT
TPRNGGVGGGGAGAAGGPNGPMSLYVGSLHFNITEDMLRGIFEPFGRVEKIELSRDPETG
RSKGYGFVHFSLAEDAKKALEQLNGFELAGRAMKVNYVTEKAGDSGWNNGLHGPGAFDSD
EIDRGGIELGAAGRLQLMAKLAEGTDIELPKAAMSALQMSSSSGVAVASSNGGSSTLIPP
IATQCFLLTNMFDRHHEASASWPEDIRNDVIEECRNHGGVLHVYVDQTSDEGHVYVKCTS
IASATATVNALHGRWFAGRLITAAFVPVIHYHNLFPESAVNTTPLSSVDAGGVSI
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagattttgacgtcgaagcgatgctggaagcgccggtcgacttcggcaagaag
gattcgggactgggctctctgaacggaggagacacgtctccctctaccacacaccaggag
aagaatggcaccaaggagtacagcagtgagcgcgacaaggagagaaagaggcacaagagg
cgaagtcgcagccgcagtcgcgatcgaaagaagcgcagcaagcgcagtcgaagcagggaa
aagcgtcgtcgaggcgaaagaggcgaaaaaggaggaaatcgaagttcaagtcggtcgcct
cgaagtcgaagtcgcagccacagccgtagccagagtcctcttcctgctgcagctgccgct
cgaaaccgaagccgaagtcgaagtcgaagtcgtgatcgcgcagttgagtcgcgcagcggt
cgccggagtcggcggtcgaacagccgcgaccgtcgtgacgatcggggtcgaaggcagcag
cgaagtttgagtcgcgaccgctacgatcggcgagacctctatggaggcggaaggagagga
ggaggaggaggaggcggtggcggctactacgaccgccgatcgcccacaccacgcgaagac
ctgcccattgaggagcgcgatcaacggacggtcttttgcatgcagctagcggcccgcgtc
cgccagcgcgacattgaggagttcttcagcaaggtgggccgcgtccgcgaggtgcgcctc
atcatggacaaccgcacccgccgccacaagggcatcgcctacgtcgagttcaaggccatc
gactcggtgggcaaggcgatcgccatgacggggacgcgcctctgcggcgtgcccattgtc
gtgcagcactcgcaggcggagaagaatcggctggcggcggcgaacgcctccacgaagacg
accccncgaaatggcggcgtcggaggaggaggagcgggagcggcgggaggccctaacgga
ccgatgagcctctacgtcggctcgctgcacttcaacatcaccgaggatatgctgcgcggc
atctttgagccctttggccgcgtggagaagattgagctgtcccgggacccggagaccggc
cgctccaagggctacggctttgtgcactttagcctggcggaggatgcgaagaaggcgctg
gaacagctgaacggctttgagctggccggccgggcgatgaaggtcaactacgtgacggag
aaggccggtgactcgggatggaacaatggcctccacggaccgggcgccttcgactcggac
gagatcgaccggggcggcattgagctgggcgccgccgggcggctgcagctgatggcgaag
ctggcggagggcaccgacattgagctgcccaaggcggcgatgagcgcccttcagatgagc
tcctcctcgggcgtggccgtcgcctcctcgaatggcggctcctcgacgctgattccgccc
attgccacgcagtgcttcctcctcacgaacatgtttgaccggcaccatgaggcgtcggcc
agctggccggaggacattcgcaatgacgtcattgaggagtgtcgcaaccacggcggcgtc
ctccacgtctacgtcgaccagacctccgacgagggccacgtctacgtcaagtgcacctcc
attgcctcggccaccgccaccgtcaatgccctccacgggcggtggtttgcgggtcgcctc
atcaccgccgcctttgtcccggtcatccactaccacaacctctttccggagtcggcggtc
aacacgacgccgctcagctcggtggacgctggcggtgtcagcatctaa
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