Rhagoletis zephyria (snowberry fruit fly): 108373454
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Entry
108373454 CDS
T08513
Name
(RefSeq) partitioning defective 3 homolog B isoform X1
KO
K04237
partitioning defective protein 3
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04144
Endocytosis
rze04391
Hippo signaling pathway - fly
rze04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09130 Environmental Information Processing
09132 Signal transduction
04391 Hippo signaling pathway - fly
108373454
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108373454
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108373454
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rze01009
]
108373454
Protein phosphatases and associated proteins [BR:
rze01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108373454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Par3_HAL_N_term
Motif
Other DBs
NCBI-GeneID:
108373454
NCBI-ProteinID:
XP_017484836
LinkDB
All DBs
Position
Unknown
AA seq
1529 aa
AA seq
DB search
MFDVPPKCPALANKLTGIFGWRHTYKVAAKHEGIQHTFLQKSYSLTMPKRPPSPYNGQKE
PDSWVAVHHLQTQSGILDPDDCVGDVADDREQILASFDDSGPDPGVPQGGGDGASGSSSV
GTGSPDIFRDPTNTDAPTNRQRSDVSTPHIEVTSTTACPMTGLGLQVRRSSDPNLLASLK
AEGGNKRWSAAAPHCGGDSPDRVLLDKSGYLAPQWEEEDDGQHNATAAPAQQPFARSGRL
SMQFLGDGTGYKWIEAAEKLQHPQQQPHNQQQQHAQQQSPHQYAPPQAQMYTTKSLPRES
KRKEPLGQAYESIREKDGEMLLIINEYGSPLGLTAIPDNEHGGGLLVQHVEPGSRAERGR
LRRGDRILEINGTKLIGLTESKVQEYLRRSLEASELRIRVLRAGSGGGSGSGNHHNGSKS
RRRDSKVAEMIEAEEKMASSVETKVATVSPTRKSHTAPVGTSLQVANTRKLGRKIEIVLK
KGPNGLGFSVTTRDNPAGGHCPIYIKNILPRGAAIEDGRLKPGDRLLEVDGVPMTGKTQT
DVVSILRATQPGATVRLVVSRQQELAELDEREINYEEKERDLNTPPKPPAPVLPSSLQKH
QRQDKLPNGVKKSNSARSLFEQHQQQQQYQLNESQHFIDAGSESAASSDSLQAGIAWRSR
EVLTLHIPVHDTEKAGLGVSVKGKTNSNSSSGSGSSMKHDGDLGIFVKNVIHGGAASRDG
RLRMNDQLLSVNGVSLLGQNNAEAMETLRRAMVNNPGKHPGMITLSVARKIARSASSGDI
LEQTNSSSNTSDNSGTTVIYLSPEKKEARSGGSGSNEMNRWSNPVLDRLTGGACSSNSSQ
QARRPSRDHLSIGVNGGGGAGGPGSAGVHGLRNESYYMATNETWSPALHQQQMMNGHVNN
NNSVLIEDDPEPISPTLPHRPNDSVCTQSGSAGVQNTSTAPTAAPASFDATYSSQLSLET
NNSSVEHFSRDALGRRSISEKHHAALDARETGTYQRNKKLREERERERRIQLTKSAIYGG
SMESLTARIANANAQIPGYKHTKTASGVEAQQLQAEARDQVGDLGPSLGLKKSSSLESLQ
TMVQEIQMSDEPRGPTALRAPRGRGREDSLRAAVVADPEAGKPRKHWLLEEGTDQDGGFA
HRNGPFQSSLNDGKHKSRAKKPSILRGIGHMFRFGKNRKDGVVPVESQPSSVAERPPASL
PNNQLPAAALAALDRNTKMLPPAYQPPPPLPPANSAGPGGSGPNGGGGGVGNMSASALNG
IHHNDIFNHRYQHYANYDELHQQQISESENNVTKQNQNSTDVLSESTLECMRQQVIRQRI
KVEAESRRHQHYHSQRSARSQDINPQHHHAAILNNRGDAGSIEKSGGLLRPSSTYYEYET
VQHNVSPAAAAAQHHQLRSGSLKQNGHHSPITVNGMQQHQQQKQHQQYNSSNNQHHHLPQ
KQQHQQAQQQSGPPPAQPHWKAAALNGFSPATLNSSARSRGPFVTHVTIRDQSSAAIAAQ
PTYQTVQKQQPQFASAVVSGGAQPHASKV
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgtaccaccgaaatgccccgctttggccaacaaactgactggcattttcggt
tggcgtcacacatacaaagttgcagccaagcacgaaggcatacagcatacattcctgcag
aaatcctattcgttaacaatgccgaaaagaccgccatcaccatacaatgggcaaaaggag
cctgattcttgggtagccgtccaccatctacaaacacagtcgggtattctcgatccagac
gattgcgtcggtgatgtcgccgacgatcgtgagcagatacttgccagcttcgatgatagc
ggtcccgatccgggcgtaccgcagggcggtggcgatggtgcttctggcagctcctctgtt
ggcacgggctctccagacatattccgcgatccaacgaacacagatgcgcccacaaatagg
caacgcagcgatgtttctacgccgcacattgaagtcacaagcaccactgcctgtcccatg
accggtctcggactgcaagtgcgtcgcagcagcgatccaaatttgttggcttcattgaaa
gcagaaggcggcaataaacgctggtcagcagcagcgccacattgcggcggagattcgccc
gatcgcgtgctactcgataaaagcggctatttggcgccgcagtgggaggaggaagatgat
ggtcaacataatgcaacagccgcgccagcgcaacagccgttcgcgcgctcggggcgcttg
tctatgcagtttctcggcgacggcactgggtacaagtggatagaggctgctgaaaagtta
caacatccacagcagcagccgcacaaccaacagcaacaacatgcgcagcagcaatcgcca
catcagtatgcgccgccacaagcgcaaatgtatacaacgaaatcgctgccacgtgagagc
aagcggaaagagccgcttggtcaggcgtacgaatcgatacgtgagaaagacggcgaaatg
ttgctcatcatcaatgagtacggcagtccgcttgggctgacggccataccggataacgaa
catggcggcggtttgttggtacagcacgtggaacctggtagtcgcgctgagcgcggacga
ttgcgacgcggtgatcgcatactcgaaattaatggcactaagctgattggattgactgag
agtaaggtgcaggaatatttgcgacgatcgctggaggcgtcggagctacgcatacgcgta
ttacgcgcgggttccggcggcggaagcggcagtggtaatcatcacaacggcagcaaatca
cgtagacgtgactccaaggtagcggaaatgattgaggctgaggagaaaatggcctcctca
gtggagactaaggtggcgacagtgtcgccaacccgtaagtcgcacaccgctccggtaggc
acatcactgcaggtggcgaatacacgcaaactggggcgcaagatcgaaatagtgctgaag
aagggtccgaacggactgggcttttcggtaacaacgcgcgataacccagctggtggacac
tgtccgatttatataaagaatatattgccacggggggcagccattgaggatggacgcttg
aagccaggcgatcggttgctggaagtggatggtgtgcccatgactggaaaaacgcaaacg
gatgtggtgtctatattgcgtgcgacgcaaccaggcgccacagttcgtttggtggtttcg
cggcagcaagagttggccgagctcgatgaacgagaaattaactatgaggaaaaagagcgc
gatttgaatacacccccaaagccgccagcaccagtgctaccgtcttctttacaaaaacat
cagcggcaggataagctgccgaatggcgtcaaaaaatctaacagcgcccgctcgctcttc
gaacagcaccaacaacagcaacagtatcaactaaacgaatctcagcatttcatagatgcg
ggcagcgagtcggcagcttcaagcgatagcctccaagcgggcatagcttggcggtcacgt
gaagtgctcacgctacacatacccgtacacgatacagagaaggccggcctgggcgttagc
gtcaaaggcaagacgaattcgaattccagcagcggcagtggctcctccatgaagcacgac
ggcgatttgggtattttcgtcaagaatgtcatacacggtggtgccgcctctcgtgatggc
cgcctgcgcatgaatgaccagttgttgagtgtgaacggcgtgtcactattgggtcaaaac
aatgccgaggctatggaaacgttgcgccgtgccatggtcaataatccgggcaagcatcct
ggcatgattactctctcggttgcgcgcaagatcgcacgctctgccagctcgggtgacata
ctcgagcagacgaatagcagctcgaataccagcgataattccggcaccaccgttatctac
ttgagtccggagaagaaggaggcacgcagtggtggcagtggttcaaatgaaatgaacaga
tggagcaatcccgtattagatcgtctaaccggtggagcttgctcgtcgaattcatctcaa
caagcgcgtcgcccgtcacgagaccacttgagcatcggtgttaatggtggtgggggagct
ggtgggcccggtagcgctggcgtacatggtctgcgcaacgaaagctactacatggcaaca
aatgaaacttggtcgccagccttacatcagcaacagatgatgaatggccatgtcaacaac
aacaattcagttttaatcgaagacgatccagagcccatatcacccactcttccacaccgt
cctaatgattccgtgtgtacgcagagcggcagtgctggtgtccagaatacttctacagca
ccaaccgccgcgcccgcgagtttcgatgctacttattcctcacaactgagtctcgaaacg
aacaattcaagtgtggaacatttctcacgcgatgcgctcggtcgccgctcgatttcggag
aaacaccacgccgcattggatgcacgcgaaacaggcacttaccagcgtaacaagaagttg
cgtgaagaacgcgaacgtgaacggcgcatacagctaacaaagtctgctatctatggcggc
tccatggagtcgctgacagcgcgtatcgcaaacgccaatgcgcaaattcccggctataaa
cacacgaaaaccgcctctggtgttgaggcgcagcagctgcaggcggaagcgcgtgatcaa
gtgggcgatttaggaccctcattgggtttgaagaaatcctcatctttggagtcgctgcaa
actatggtgcaggagatacaaatgtcggatgagccacgcgggccgacagctttacgtgcg
ccgcgtggacgtggacgtgaggatagtctacgcgccgctgtggtggcagatccggaggct
ggcaagccacgcaagcactggttgctcgaggagggcaccgatcaagatggcggctttgcg
caccgaaacggaccctttcagagttcgctgaacgatggcaagcataagtcgcgcgccaag
aagccgagtatattgcgtggtatcggacatatgtttcgtttcggcaagaatcgtaaagat
ggcgttgtaccggtagagtcgcagccgtcttcggtggctgaacgtccgccggccagtttg
cccaacaatcagttgcccgcagcagcattggctgcactcgatcgaaatacgaaaatgcta
ccgccagcatatcaaccgccaccgcctttgccgccagcaaatagcgctgggccgggtggc
agtggcccaaacggtggcggtggcggagtgggtaatatgtcggcgagcgcgttgaatggc
atacatcataatgatattttcaatcatcgctatcagcactatgccaactacgacgagctg
catcagcaacagattagcgaaagcgaaaacaacgtgactaaacaaaatcaaaatagtaca
gatgttttatcggagtcgacattagaatgcatgcggcaacaagttatcaggcagcgcatt
aaagtcgaagcggaaagtcgccgtcatcaacattaccattctcaacgcagtgcgcgctca
caagacatcaatccgcagcatcatcatgcagccatattaaacaaccgaggcgacgctgga
agcattgagaagagtggcggcctactgcgaccctcatcaacctactatgaatatgagaca
gtgcaacataatgtgagtccagcggcagcggcagcacagcatcatcaactacgtagcggt
agcctgaaacagaatggacatcactcgccgattacggtgaatggtatgcaacagcatcag
caacagaaacagcaccaacaatataacagcagcaataaccaacaccaccacctccctcaa
aaacaacaacaccagcaggcgcaacaacaatcaggtccgccaccagcgcaaccgcattgg
aaggcagccgccttaaatggcttttcccccgccacgctcaacagcagtgcacgcagccgc
ggcccatttgtcacgcatgtgactatacgcgatcagagttcggcggcgattgccgcgcaa
cccacataccaaacagtacagaagcagcagccacaattcgcaagtgctgtcgttagcggt
ggcgcgcagccgcatgcgtcgaaagtgtga
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integrated database retrieval system
