Rhagoletis zephyria (snowberry fruit fly): 108373476
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Entry
108373476 CDS
T08513
Name
(RefSeq) CUGBP Elav-like family member 2 isoform X1
KO
K02177
bruno
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
108373476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108373476
03041 Spliceosome [BR:
rze03041
]
108373476
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
108373476
Spliceosome [BR:
rze03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108373476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_10
RNA_bind
Motif
Other DBs
NCBI-GeneID:
108373476
NCBI-ProteinID:
XP_017484863
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MLSSLDALAGKISPGSGKNSPPQQTQPQQHQSNSNQTSATHIAQQQLQQQQSTTITCQLQ
QPHLPATREQHQRFNGNHHNALDSNCNKLCHISHNSTHPYQKQLPAQHNQQQMQNNCQQQ
QELQQQQHELFQQHQTFLLHPQLSPEESDPQLDFRSCLKENVFGMSDKSSITNSLPNSPI
HTSTSANNNNNSSINGNNGCNKSPTLLKNSNSNSSTGLINGSNNNGPPSLCNANGNNNNN
TCSANRNVLDNESPCFRMDADVPFGEKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPV
HSINVLRDKATGISKGCCFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNE
RKLFVGMLNKKLNENDVRKLFEVHGPIEECTVLRDQSGQSKGCAFVTFATKHAAISAIKL
TLNQNKTMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNLASNINIPVGQTSTTVSTPV
LANPPQQASPVLGPEAITPASLQLIQQLQAVGLQQQLLQGLCAQTSTTDTATAAAAAAGL
LPPMTIQNLAAIAAMTQPSLSNAATNPGSAHITNTAALLWSDPNPLTSAYSMSPAAGLPQ
FGSTTLSASPLTSMALSSAAAAAAGKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNV
ISAKVFIDKQTNLSKCFGFVSFDNPESAQVAIKAMNGFQVGTKRLKVQLKKPKDASKPY
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttaagttcgctcgatgctttagccgggaaaatatcacctggttctggtaagaatagt
ccgccccagcagacacagccacaacagcatcaaagcaatagcaaccagacatcagcgacg
catattgcacagcaacaactacagcagcagcaatcgaccaccattacctgccaattacaa
caaccacacctgccagcgacaagagaacaacaccagcgtttcaatgggaatcaccataat
gcactggatagcaactgcaataaattatgtcacatcagtcacaacagcacacacccatac
cagaaacaattgcctgctcaacacaatcaacaacaaatgcaaaacaattgtcagcagcag
caagaattgcaacaacagcaacatgagctgttccagcagcatcaaacatttctactccat
ccacagctatcgccagaggaatccgatccacagctggatttccgtagttgcctgaaggag
aatgtatttggtatgagtgataaaagcagtatcactaacagccttcccaatagtcctatt
catacttccacgtcggccaacaacaataacaacagcagcattaacggaaataatggctgc
aataagagtccaactctgctcaagaatagcaatagcaacagcagcacaggccttatcaac
ggcagcaacaacaatggaccaccaagtctgtgtaatgccaatggcaacaataacaacaac
acatgcagtgccaatcgtaacgttctcgacaatgaatcaccatgcttccgcatggatgcc
gacgtgccgttcggcgagaaagagcccgacccagacaatatcaaaatgtttgttgggcaa
gtgccaaaatccatggatgaagcacaattgcgtgaaatgtttgaggagtatggtccagta
cattcaataaatgtactgcgcgataaagcgactggaatcagtaaaggttgttgttttgtg
acattttatacacgtcgcgctgccttaaaagcccaagatgctctgcataatgtaaaaacg
ttaaacgggatgtatcatcctattcaaatgaagccagcggatagcgaaaatcgaaatgaa
cggaagctgtttgttggaatgctgaataagaagctaaacgagaacgacgtacggaaatta
ttcgaagttcacggccccatcgaggagtgtacggtgttacgtgatcagagcggccaaagt
aaggggtgtgcctttgttacatttgcaactaaacacgcagcgatatcagcgataaaattg
actttgaatcaaaataaaacaatggagggctgcacttccccgcttgttgtgaaattcgct
gatacgcagaaggagaaggagcagaagaaaatacagcaaattcaagcaaatctttggaat
ttagcatcaaacataaatataccagtaggtcagacttcaaccaccgtttcaaccccagta
cttgcgaatccgccacagcaggcgagcccagtattggggcccgaggctattacaccggcg
tccttgcaattgattcaacagttgcaagcggttggactgcaacaacaactgctgcaaggt
ttgtgcgcccaaacgagtaccacggacacagcaactgctgccgccgccgcagctggactg
ttaccaccgatgacgatacaaaatttggccgccatcgcggccatgacacaaccctctcta
agcaacgctgccactaacccgggaagtgcgcatataacaaatacagcagctctgttatgg
tctgatccgaacccgttaacgtccgcgtatagtatgtcaccggcagctggattgccacaa
ttcggtagcaccacattatcggcctcgccactgaccagtatggcattaagtagtgccgca
gctgcagcggctggcaaacaaatcgaaggtcctgaaggatgtaatttattcatctatcac
ctaccacaagaattcaccgatactgatttggcatcaacttttcttccattcggcaatgtc
atttccgccaaagttttcatagataagcaaaccaatctttccaaatgtttcggttttgta
tctttcgataacccggaatcagcgcaagtggccatcaaagcaatgaatggttttcaagtg
ggcactaagcgtttgaaggtgcagttgaagaaacccaaggacgcttcgaagccttactag
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