Rhagoletis zephyria (snowberry fruit fly): 108373619
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Entry
108373619 CDS
T08513
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03030
DNA replication
rze03420
Nucleotide excision repair
rze03430
Mismatch repair
rze03440
Homologous recombination
rze03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108373619
03420 Nucleotide excision repair
108373619
03430 Mismatch repair
108373619
03440 Homologous recombination
108373619
03460 Fanconi anemia pathway
108373619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rze03000
]
108373619
03032 DNA replication proteins [BR:
rze03032
]
108373619
03400 DNA repair and recombination proteins [BR:
rze03400
]
108373619
Transcription factors [BR:
rze03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108373619
DNA replication proteins [BR:
rze03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
108373619
DNA repair and recombination proteins [BR:
rze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
108373619
MMR (mismatch excision repair)
108373619
DSBR (double strand breaks repair)
HR (homologous recombination)
108373619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
OB_MEIOB_N
IBR
Motif
Other DBs
NCBI-GeneID:
108373619
NCBI-ProteinID:
XP_017485028
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MAGITPLSTGVIERIMRGEEVDKPILQILGTKKITGGETDRLRLLISDGKYINSYSMLAT
QLNHLHAEGKLAEYTIVQVDKYITSVVNAKDAGKRVLIILELSVLNPGAEVGRKIGTPVS
YTEDAAAQSNKASSSSSTAPKPNAPANSFKNDTKPSLYNNNNNSMLNQSLNSGLTHPISS
LSPYQNKWVIKARVTAKGPMRTWSNAKGEGKLFSMDLMDESGEIRATAFREQAEKFYDLI
EVDRVYFISKCQLKPANKQFTSLKNDYEMTLTGETMIQACEEDDSDIPEIKYDLVPISQV
ANLEPRTSIDTIGICKEVTELQTFTSRTTNKEFKKRELVLVDSSNAAVNLTLWGDEAVNF
DGYVQPVILVKGARVTEFNGGKSISMGSGSVMKINPDIPEGHKLRGWFDNGGGEHISNMI
STRTGGAGGGFSTEWLTFHEARIRNLGAGDKADYFQCKGIVHIVKSQNAFYKACPQQDCN
KKVIDENNGHYRCERCNAVFPNFKYRLLINMSIGDWTSNRWVTCFSEVAEQMLKRSSQEI
GELLENNPPEGEEVLSSINFTSYIFKLRSKMEMFGDMQRNKLTVQSVAPVDYKEYNKYLI
NNLKELTGINKN
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaataactccattgtccaccggcgttattgaacgcataatgcgaggggaagaa
gtagataaacctattttgcagatattgggcacaaagaaaatcaccggtggtgaaacagat
cgcctgcgcttgctgatttccgacggcaaatatatcaacagttattccatgttagcaacg
caactaaatcatttgcatgccgaaggaaagcttgcggaatatactatagtccaagtagac
aaatatataacatcagtagttaatgcgaaagatgctggcaagcgtgtgttaataatacta
gagttgagtgttctaaacccaggcgcggaagtaggcagaaagattggaacacccgtttct
tacacggaggatgccgctgctcaaagtaataaagccagttcaagtagtagtactgccccc
aagccaaatgctccggcaaattcatttaaaaacgatacaaaaccgtccctatacaacaac
aataacaatagtatgttgaatcagtcactgaactctggacttacgcatccaatctctagc
ctgagcccatatcaaaataagtgggttattaaggcacgtgttacggccaagggtcccatg
cgcacctggagcaatgcaaaaggtgagggcaagctttttagcatggatttaatggacgag
tcaggagaaatacgcgcgactgcttttcgtgagcaggctgagaaattctacgatttaatc
gaagttgatcgcgtctacttcatttcaaaatgtcaacttaaaccggcaaataaacagttt
acatcactgaaaaatgactatgaaatgacattgactggggaaacaatgatccaagcatgc
gaggaagacgacagcgatattccagaaataaagtacgatttggtaccaatatctcaggtg
gccaatcttgagcctcgcacaagtatcgatacaattggtatttgcaaagaagttactgag
ctacaaacttttacttctcgtacaactaataaagaatttaagaagcgtgagctggtactc
gttgattcgagcaatgcagctgtaaatttaactttgtggggcgatgaagctgttaacttc
gatggctatgtgcagccagtgattttagtgaaaggtgcacgtgtaacagaattcaatggt
ggtaaaagcattagcatgggaagtggctctgtaatgaaaataaacccagacattcctgaa
ggacataaattgcgtggttggtttgataacggtggtggggaacatatatcgaatatgatt
tcaaccagaactggtggagctggtggtggctttagcacagaatggttaacattccatgag
gcacgtattcggaatttaggcgccggcgacaaggctgattactttcaatgcaaaggcatt
gtgcacattgttaaaagtcaaaacgcattttacaaggcttgtccgcagcaggactgcaat
aagaaagtcattgacgagaacaatggacattatcgctgtgagcgttgtaacgccgttttt
cccaacttcaaatatagacttttaataaatatgagtattggtgattggacctcaaaccgc
tgggtcacttgctttagcgaagtcgctgaacaaatgctgaaacgttcatctcaggaaata
ggtgaactcctagaaaacaatccccctgaaggtgaagaagtactttcgtcgattaacttt
acttcgtatattttcaaattgcgcagcaaaatggaaatgtttggtgacatgcaacgtaat
aaattgacagtacaatctgtcgctcccgtagattacaaggaatacaacaaatatttgata
aacaatctgaaggagttaactggcatcaacaaaaattga
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integrated database retrieval system
