Rhagoletis zephyria (snowberry fruit fly): 108373715
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Entry
108373715 CDS
T08513
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108373715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rze03041
]
108373715
Spliceosome [BR:
rze03041
]
Common components
Common spliceosomal components
SR proteins
108373715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
RRM_occluded
Nup35_RRM_2
SET_assoc
DbpA
Motif
Other DBs
NCBI-GeneID:
108373715
NCBI-ProteinID:
XP_017485139
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
MTSGTRIYVGRISYDVRERDIEKFFKGYGRIREILLKDGFAFVEFDDNRDAEDAVYELNG
KDLLGERVHVEFARGPGRGRGGGRFGGGGGGGSFSSSRYGPPRNTEYRVIVENLSSRVSW
QDLKDFMRQAGEVTYADAHKREKNMGIVDFASYSDMKAAVEKLDGHDLHGRRIRLQEDKS
RRRRSRSRSRSRSNRRAATKSRSRSRSRSNRRAASKSRSRSRSPASRSRSRSPATGAGNG
DRDRSRSASAEHSSGKGGGSSSAVKAERRSRSRSRSRSGSAERSGGAGNGGGSGDRDRRS
RSRSAKSESESERSKSRSRSKSRSPSKSHSRSKSPADEEEGTEQS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcggtacgcgcatctacgtgggccgcataagctacgacgttcgcgagcgagat
atagaaaagtttttcaaaggttatggccgcattcgcgagatactgctcaaggatgggttt
gcgtttgtggaatttgacgataatcgagacgctgaagatgccgtctacgagctgaacggc
aaagatctgcttggtgaacgagttcatgttgagtttgctcgcgggccaggccgcggtcga
ggtgggggccgcttcggcggcggaggaggaggaggtagtttcagcagcagcagatatgga
ccaccgcgcaacactgaatatcgcgtcatcgtggagaatctcagcagccgagtctcttgg
caggatctgaaggattttatgcgtcaggcgggagaggtgacctacgctgacgcgcacaag
cgcgaaaagaatatgggcatcgtcgactttgcctcctactctgacatgaaggccgccgtg
gagaagctggacggccacgatctgcatggccgtcgcatccgcctgcaggaggacaagtca
cgtcgtcgtcgttcgcgcagccgaagtcgcagtcgctcgaaccgccgtgcggccaccaag
tcccgatcgcgtagtcgcagccgatcgaaccgccgagccgccagcaagtcccgctcgcgc
agtcgtagccctgctagtcgttcgcgctctcgctcgccggccacgggcgccggaaatggc
gatcgcgatcgctcccgctcagcctcggccgagcactccagcggcaagggcggcggcagc
agcagcgcagtgaaggctgaacgccgttcacgttctcgttcgcgctcacgttcagggtcg
gcggagcgcagcggcggtgccggaaacggcgggggcagcggcgatcgtgatcgtcgctct
cgctctcgttccgccaagtccgagtcggagtctgagcgctccaagtctcgttcccgctcc
aagtctcgctcgccctccaagtcgcactcccgttccaagtcacccgccgatgaggaggag
ggcactgagcaatcgtaa
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