Rhagoletis zephyria (snowberry fruit fly): 108373855
Help
Entry
108373855 CDS
T08513
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rze01002
]
108373855
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rze04121
]
108373855
Enzymes [BR:
rze01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108373855
Peptidases and inhibitors [BR:
rze01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108373855
Ubiquitin system [BR:
rze04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108373855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
108373855
NCBI-ProteinID:
XP_017485288
LinkDB
All DBs
Position
Unknown
AA seq
1726 aa
AA seq
DB search
MLQTMCRVQGQMQSGGGGGGSAAVSVGVGSGSSAVQSGAKDEEADVVGVGSGSVVSSGVV
SGSTGVQNTTTFDSDQLNPQECTPEMLFLHGTPAQVLYNLGVLNGLLIPALDPYGEAALQ
VQSAWLHSGCAHFILELLTKNNFLPNADMHTKRAAFHCVLRLARLFLYTVGYVLSRVGDE
PMLRDFDVGARSQVEILKQILSSIPNNSESTMRAISTKLAEILAAEMLSASAEGERCRIL
FSSTLQWSSPDITTIKAVIQLAWSSSCGNLQALGNKNDFANDITMPDAQDFAMCKEALEV
LTISLVLNPSANEALSNDPIWPKFITSLILKNPSRHVRQIAADQLFLSCTYCAGDRRPFA
YMVNLLVNSLKVLVPQYEATCADFFQLLCRTLSYGSVCNWPLNIGDGLLTEEINWLQKIR
ENVLVTGDIQVHEDLLEGHLCLAKELMFFLSPETKAQLTDLIDEVIDIFLFPSSREYLHL
RKFNKLRNPTSPPPVCRSPHTIAAACDLLIALCQNSVPNMKLLTNTLIDFVCTDTEPLRE
WDFLPPVGPRPIKGFCGLKNAGATCYMNSVLQQLYMVPSIRVGILKADGAATIENEDFSG
ESDVASINSALFSSPGSGEDNSSTDVRKNYHVVILKYVQAIFAHLGHSALQYYVPRGLWA
YFKLQGEPVNLREQQDAVEFFMSLFESLDEGLKALGHTQLMNATLGGSFSDQKICQECPH
RYSKEEPFSVFSVDIRNHSSLTESLEQYVKGELLEGADAYHCDKCDKKVVTVKRLCVRKL
PPVLAIQLKRFEYDYERVCAIKFNDYFEFPRVLDMEPYTVSGLAKLEGEVVEVGDNCQSN
GETTKYELTGIVVHSGQASGGHYFSYILSKNPSTGKEQWYKFDDGEVSECKMHEDEELKA
QCFGGDYMGEIYDNNLKRMQYRRQKRWWNAYMLFYTRYDQKPVQFEPCVEQLSLAESRNF
VLPLPKPIERSVRHQNIRFLHSKSIFSVEFFNFIKKLVSCSIPSTRPDKMTPAAEELSLL
GVQLASQFLFHTGFRTKKSLRGPVIEWYDTLSHHIRFSSLVRKWFANNALLNPASRLGEY
ILMAPSPEVRTVFVKLVVFFCHFAIADEPLAGYEGSNLCEQILISVLELLKCEAVDYGKH
LPHYFSLFSMYVGLGIPEKQQLLKLNVPFIFMQVALDEGPGPSIKYQYPELSKLHQVVSH
LIRCSDISDKCQNSNQNAQPLENPYKDPNIRREELMPLSPECADILFNRTGYIKKLIEDT
AVGEEGIKLLQYCSWENPHFSRAVLTELLWQCGFAYCHDMRHHTELLLHILLIEDSWQHH
RIHNALNGVAEEREGLLETIQRTKTHYQKRAYQIIKCLTQLFHKSQVALQMLNSNASIAR
HWTMAVEWLQDELERQRSCQYNSYSWSPPAQSNDNTNGYMLERSQSAKNTWSMAYELCPE
EEQEETNESDIEPTDETQRQQQQITQTLQTPAVGDALTSDTVPASPAHKPFIVGMAPGCT
IDWSAANTFSVDSQTATTTTTSTTSSGSGVGVGVGVGIGVGGGTSSSVVTAVNSTEPQQA
ATDANINGLTANVKQLALSPKTSTSGGIGETTMTSMTTMMTGQDIENSKQAVLTTQQQLQ
QQQQTMAIISPALMQHQQPAVAVVTLALTTTTTTTTTSTTTISISLPVNTIIATATTTTP
ATVTPTATTLINTLTAVATSTTANKLESSDKMTTKTTLNSEEQRIT
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagacgatgtgccgcgtgcagggacagatgcagagcggtggtggtggtggtggc
agtgcagctgtgagtgtgggagttggttctggtagcagcgctgtacaaagtggcgccaaa
gacgaagaggctgatgttgttggcgttggctccggcagcgtggttagcagtggtgttgtt
agcggcagcactggagtgcaaaacacaacaacatttgatagtgatcaactaaatccacaa
gaatgcacgccagaaatgttattcttgcatggtactcccgcgcaagtattgtacaacttg
ggtgttttgaatggcctactcatacccgcattggatccttacggcgaggcggcactgcaa
gtgcaatctgcttggctgcactcgggttgcgcgcatttcattttggagttactaaccaaa
aataatttcctacccaatgctgatatgcacaccaaacgtgctgcgtttcattgtgtgttg
cgtctggccaggttgttcctctacactgttggctatgtgctatcacgtgtcggcgacgag
ccaatgcttcgtgactttgatgttggcgcacgctcacaagtcgaaatacttaagcaaata
ctgagctcaataccgaataattcggagagcaccatgcgcgctatttccacgaagttagct
gaaattttagctgcggaaatgctttcggccagtgccgaaggcgaacgctgtcgcatccta
tttagttcgacgttgcaatggtcctctccggacattacgactattaaggcagtcatacaa
ttggcttggtcgtcatcctgtggcaatctgcaggcgcttggtaataagaatgacttcgct
aacgacatcacaatgccggatgcacaagatttcgcaatgtgcaaagaggctttagaagtg
ctaaccatttcattggtgcttaatccgagtgctaacgaggcgttgagtaacgatcccatt
tggccgaaattcattacatcgcttatactaaagaatccatcgcgccatgtgcgtcaaata
gctgctgatcagctgtttctttcgtgcacctattgcgccggcgaccgacgtccattcgct
tacatggtaaatctgctcgtaaattcattgaaggtactggtgccgcaatacgaggccaca
tgcgctgacttctttcaactgctgtgccgcacactctcgtacggaagcgtatgtaattgg
ccgctcaacatcggcgatggtctgctgactgaggagatcaattggttgcaaaagatacgc
gagaatgttttagtcaccggcgatatacaggtgcatgaagatttgttggagggacatttg
tgcttggccaaagagttgatgtttttcttgtcgcccgaaaccaaagcgcaacttaccgat
ctgatagatgaggttattgatatctttctgttcccatcatcacgagagtatctccacttg
cgaaagttcaataagctgaggaacccaacctcgccaccacccgtctgtcgcagtccgcac
accatagcagcggcttgcgatttgttgatagcactttgtcagaattctgttcctaacatg
aagctgctaactaatacgcttatagatttcgtatgcacagatacggagccgttgcgcgaa
tgggacttcttaccgccagttgggccgcgaccgataaaaggattttgtggtttgaaaaat
gccggtgccacgtgttacatgaattcggtgctgcaacaattatatatggtgccatccata
cgcgtcggcatactgaaagctgatggcgctgctacaattgagaatgaggattttagtggt
gagtctgatgtggccagtattaatagtgcgctattctccagtcctggtagcggtgaagac
aatagcagcactgatgtgcgaaaaaactatcatgtggtgatattgaagtatgtgcaggcg
atatttgcccatttgggtcacagtgcactgcaatactatgtgccgcgtggcctttgggcg
tacttcaaattacaaggcgaacccgtgaatttacgtgagcaacaagatgctgttgaattt
ttcatgtcactattcgaaagcctggatgaaggtctcaaggctttaggtcatactcaacta
atgaatgccactttgggtggttcatttagcgatcaaaagatttgccaagaatgtccgcat
cgatattccaaggaggagccattcagtgtgttcagcgtggatattcgaaatcatagctca
ctaaccgaatcgttggagcagtatgtaaagggtgaacttctagagggagctgatgcatac
cattgtgataaatgtgataaaaaagtagttacagttaagcggttgtgtgtaagaaaacta
ccgcctgtgttagccattcaattaaaacgtttcgaatacgattacgagcgcgtttgcgct
attaaatttaacgattactttgagttcccacgtgtactcgatatggaaccatatacagta
tctggcttagccaaactggagggtgaagtcgtcgaggtgggcgataattgccaatcaaat
ggcgaaactaccaaatatgagttaactggcattgtggtacatagcggacaggcctccggt
ggccattactttagttacatactttctaagaatccctccactggtaaggagcaatggtat
aaattcgacgatggtgaggtgagcgaatgcaaaatgcacgaggatgaagagttgaaagca
caatgctttggcggtgattacatgggcgagatttatgataataatttgaagcgcatgcaa
tacagacgtcaaaagcgatggtggaatgcatatatgctgttctatacacgttacgatcaa
aagcctgtacaatttgaaccttgtgtggagcaattgtcattggcagaaagtcgcaatttc
gtattgccgctgccaaagccgatcgagcgcagtgtacgccatcaaaatatacgattttta
cactcaaagagcatattctctgtggaattcttcaatttcattaagaaattagttagctgc
agtattccttcaacacgtcccgataaaatgacaccagctgctgaagaactttcattgttg
ggtgtgcaattagcatcgcaattcttattccacacaggttttagaacgaaaaaatcgctg
cgtggacctgttatagaatggtatgatacactatcacatcacattcgcttctcctcattg
gtgcgcaaatggtttgcaaataatgcgcttctcaatcctgcgtctcgtctcggcgaatat
atcttaatggctccatcaccggaggtacgcactgtatttgtaaagttggtagttttcttc
tgccactttgctatagccgacgagccgctggctggctacgaaggcagcaatctgtgtgaa
cagattttgattagcgtattggaactgctgaagtgtgaggctgtcgattatggcaagcat
ttgccacactactttagtttattcagcatgtacgtgggcttgggtataccagaaaagcag
cagttgttgaagttgaatgtgccctttatattcatgcaagtcgctttggatgaaggtcct
ggtccatcgataaaataccagtatcccgaactgagcaagttgcatcaggtagtttcgcat
ttaatacgttgcagcgatatctctgacaagtgccagaattcgaatcaaaatgcacaacct
cttgagaatccatataaagatccaaatataaggcgcgaggaactcatgccattatcgcca
gaatgtgcggacatactctttaatcgtaccggttacattaagaagctaatagaggacaca
gctgttggtgaggaaggtatcaagctactacagtactgcagctgggaaaatccacatttc
tcacgtgccgtactaacagaactgctgtggcaatgcggtttcgcttattgccacgatatg
cgccatcacaccgaactgttgctgcatatattactaatcgaggattcgtggcaacatcat
cgcatacataatgcgctcaacggtgtagcggaggagcgcgaaggcttgctggagacgata
cagcgcacaaagacacattatcaaaagcgcgcataccaaataatcaaatgccttacacaa
ctattccacaaatcacaggtggccctacagatgctgaactcgaacgccagtatcgcacgg
cactggaccatggcagtggaatggttgcaagatgaattggaacggcaacgtagttgtcaa
tacaattcatattcgtggtcaccacccgcacagagcaatgacaacacaaatggctacatg
ctcgaacgttcacaatctgccaagaatacatggtccatggcgtatgaattatgccctgaa
gaggaacaagaagagaccaacgagtcggatatcgagccaaccgatgagacgcaacgacag
caacaacaaattacacaaaccctgcagacacccgccgtgggtgatgcgcttacaagtgat
acagtaccggcaagtccagcacacaaaccgtttattgtgggcatggctccgggttgcacc
attgactggtctgctgcgaatacattttcggttgatagtcaaacagcaacaactacgacc
acttctaccacaagcagtggaagtggtgttggcgtcggcgtcggcgtcggcattggtgtt
ggcggcggaactagcagtagtgttgtgacagctgtaaatagcactgaaccacagcaagcc
gcaacagatgcgaatatcaatggcttgacggcgaacgtgaagcagctggcactctctcca
aaaacgtccaccagcggcggcattggtgagacgacaatgacttcaatgacgacaatgatg
actggccaagacatcgaaaactccaagcaagcagtgctgacaacacagcagcaactccaa
cagcagcagcagacaatggcaataatatcgccggcacttatgcaacaccaacaaccagca
gtagcagtagtgacgttagcattaacaacaacaacaacaacaacaacaacatcaaccaca
acgatttcaatcagtttgcctgtaaatacaataattgcaacagctacaaccacaacgcca
gcaacagtaacaccaacagcaacaacactaataaacaccctcacagcggtagcaacatca
acgacagccaacaaattggaaagtagcgataaaatgacaacaaaaacaacactgaactca
gaagaacagcgcataacgtag
DBGET
integrated database retrieval system
