Rhagoletis zephyria (snowberry fruit fly): 108373898
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Entry
108373898 CDS
T08513
Name
(RefSeq) spectrin alpha chain-like
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108373898
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rze04812
]
108373898
Cytoskeleton proteins [BR:
rze04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108373898
Intermediate filaments
Intermediate filament-binding proteins
108373898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
SH3_1
SH3_9
SH3_2
SH3_10
SH3_3
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
108373898
NCBI-ProteinID:
XP_017485321
LinkDB
All DBs
Position
Unknown
AA seq
1781 aa
AA seq
DB search
MDVPPAKDIKILETVQEIQDRRKTVLSRYDAFKDGSKSKRSKLEDSRRFQYFKRDADELE
SWINEKLQTASDESYKDPTNLQAKIQKHQAFEAEVLAHSNAIVELDQNGFEMISQNHYAS
EVIKDRLDELHRLWDLLLSKLNDKGYKLQQALVLVQFLRQCDELMFWIKDKEAIVASDDI
GHDLEHVEVLQRKFDEFKKDMASQEFRINEIDQKAAELIQADHTEKEQISRRAAEIHEAW
ARLLELKKRREEKLFGAHEIQRFNRDADEAISWINEKDAIISTDDYGRDLVSVQNLQRKH
EGVERDLGALAEKVDLLSQEADRLCEKHPDLAEQTQAKQREIEGAWRQLQSKSAERRVKL
EHSYLLQQFLADYRDLISWIHDMKTIISSDELAKDVAGAEALLERLQEHQSEIEARKDAF
AAFKVSGQSLIDNGISPAEVGEKMAALESEYESLIQLREERRILYEQCMDLQLFYRDTEQ
AETWMTKHETFLLNEDLGDSLDSVEALLKKHDDFEKTLATQSETVNNLDKFGERLIEAQH
YAKEDIQERREVLLQRRSQILERSAKRRNLLMEAYQLQQFERDCDEIKGLITEKLKTAID
ENYRDPTNINGKLQKHQQFNQELEANRGRVEEVNETGNELVEKKHYAAEHIKARVAEINE
LWSAVNDSSEKKGSKLMEASSQQKFNRNVEDVELWLSEMESQIVSEDVGKDLTSVQNMLK
KHALIESDIASHQDRIDDIARQADKFVEDGHFDAESIKAKQAALNDRYHSLKTPLNRRKA
RLNDALKVQQLFRDIEDEEAWIREKEPIAASTNRGRDLIGVQNLMKKHQAMIAEINNHEH
RIRTVEQVGEDMIHTGHFASEDINRRLVWLNEQWHSLKEKAARRKQDLEDSLQAQQYLAD
ANEAESWMREKEPIVGSDDYGKDEDSTEALLKKHEAIMADLEAFENTIRNLRGQAQSCRQ
QEAPSGEYVPGREAVVALYDYAEKSPREVSMKKGDVLTLLNASNKDWWKVEVNDRQGFVP
AAYVRRVDESLSASRQHLLSQNSLSARQTQIEAQYESLLQLGRERKRKLEEACRGYQLIR
EAAELTQWVKDKEQVASVGEVGEDLEHVEVLQKKFDDFLSDLKSNEVRLTEMNQMANQLA
DLGQTEAANKINRQVEELNQKWVHLQEMTSSREQQLASAHEVQRFHRDIDETKDWIREKD
EALDTDDEGSDLRSVQTLQRKHEGLERDLEALYEKVKQLDKTAANIEHRHPESAEQTREK
QTEIIEEWNKLRIKANERRVKLSNSYELQRFLNDHSDLMLWINSMSSLVSSDELASDTIG
AEALLERHGELWTEIHARRTNYNTIEEFGQRLIRNQHYAADLVKEKLGALYHAFQDLERA
WTERNEKLRQCLDLQLFYRECEQAESWMANRESFLTSPDDDDNVDILIKKHEDLNKAIRI
QEEKIENLKRLADNLVENNNYAKESIEDKRDQVLERWNLLKEALIEKRSKLGDTQTLQQF
SRDADEIEKWITEKMQMAMDESYKDPTNIQSKHQKHQAFEAELSANQERIQQILAMGDNL
IDKDKCSGSDDAVRQRLTIITEQWKYLTEKTTEKSVKLKEANKQRSYNAAIKDIDFWLGE
VESLLKSEDVGKDLNSVQNLIKKHQLVEADIIAHEDRVKDMNVLADSLIDAGQFDTNVIQ
ERRASINERYERIRTLATYRRNRLNEANTLHQFFRDIADEESWIKEKKLLVSSDDYGRDL
TGVKNLHKKHKRFENELAAHEPTIQAVQEAGQKLMLESNLG
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atggacgttccgccggccaaggatattaaaattttagaaacagttcaggagattcaagac
cgccgaaagaccgttctcagtcgctacgatgccttcaaggatggctcgaagagtaagcgc
tccaagttggaggactctcgccgtttccagtacttcaagcgagatgccgacgagctggag
tcgtggatcaacgaaaagctgcagactgcctcggatgagtcctacaaagaccccaccaac
cttcaggcgaaaattcaaaaacatcaagcctttgaggccgaggtgttggctcattccaac
gccatcgttgagctcgaccagaacggttttgagatgatttcgcagaatcactatgcatcg
gaagtgatcaaggatcgcctcgacgagctgcatcgcctgtgggatctgctgctttccaaa
ctcaacgacaagggctacaaacttcagcaggccctggtgctggtgcagtttcttcgccag
tgcgatgagctgatgttttggatcaaggacaaggaagcgattgtcgcctccgatgacatc
ggccacgacctcgagcacgtcgaagtgctgcagcgcaagttcgacgagttcaagaaggac
atggccagccaggagtttcgcatcaacgagatcgaccagaaggcagcggagctgattcag
gcagatcacacggagaaggagcagatcagccgccgagcggcggagattcacgaggcctgg
gctcgcctgctggagctgaagaagcgacgagaggagaagctgtttggcgcccacgagatt
cagcgcttcaaccgcgacgccgatgaggccatttcgtggatcaacgaaaaggacgccatc
atctccacggacgactacgggcgcgacctcgtctcggtgcagaacctgcagcggaagcac
gagggcgtcgagcgcgacctgggcgccctcgcggagaaggtcgacctgctgagtcaggag
gcggaccgcctctgcgagaagcaccccgacctggccgagcagacgcaggcgaagcagcgg
gagattgagggtgcctggcggcagctgcagagcaagtccgccgagcggcgcgtcaagctg
gagcactcctacctgctgcagcagtttctcgccgactaccgcgacctgatcagctggatt
cacgacatgaagaccatcatctcctcggacgagctggcgaaggacgtggccggggcggag
gcgctgctcgagcgcctgcaggagcaccagagcgagattgaggcgcgcaaggacgccttt
gccgccttcaaggtctccgggcagtcgttgattgacaacggcatttcgccggctgaggtg
ggcgagaagatggccgccctcgagtcggagtacgagtcgctgattcagctgcgtgaggag
cgccgtatcctctacgagcagtgcatggacctgcagctcttctaccgcgacaccgaacag
gcggagacgtggatgacgaagcacgagaccttcctcctcaatgaagacctgggcgactcg
ctggactcggtggaggcgctgctgaagaagcacgacgacttcgagaagacgctcgctacg
cagtcagagacggtgaacaacctggacaagttcggcgaacggctgatcgaggcgcagcac
tacgccaaggaggacattcaggagcgccgggaggtgctgctgcagcggcggtcgcagatc
ctcgagcgcagcgccaagcggcgcaacctgctgatggaggcctaccagctgcagcagttt
gaacgggactgcgacgagatcaagggcctcatcaccgagaagctgaagacggccattgac
gagaactaccgcgacccgacgaacatcaacgggaagctgcagaagcaccagcagttcaac
caggagctggaggcgaatcgcggaagagtggaggaggtcaatgagaccggcaatgagctg
gtggagaagaagcactacgccgcggagcacatcaaggcgcgcgtcgcggagatcaacgag
ctgtggtccgccgtgaacgactcctcggagaagaagggctccaagctgatggaggcctcc
tcgcagcagaagtttaaccgaaacgtcgaggacgtcgagctgtggctctccgagatggag
agtcaaatcgtctcggaggacgtcggcaaggacctcacctcggtgcagaacatgctgaag
aagcacgcgctgattgagtctgacattgcctcgcaccaggaccgcattgacgatattgcc
cgccaggcggacaagtttgtcgaggacgggcactttgatgcggagagcatcaaggcgaag
caggcggccctcaatgatcgctaccactcgctgaagacgccgctgaaccgccgtaaggct
cgcctgaatgacgccctcaaggtgcagcagctcttccgggacattgaagacgaggaggcg
tggatccgcgagaaggagcccattgccgcgtccaccaaccgaggccgtgacctgattggc
gtgcagaacctaatgaagaagcaccaggcgatgattgcggagatcaacaatcacgagcac
cgcattcgcacggtggagcaggtgggcgaggacatgatccacacggggcactttgcctcg
gaggacatcaaccgccgcctggtgtggctcaatgagcagtggcactcgctgaaggagaag
gccgcccggcgcaagcaggacctggaggactcgctgcaggcgcagcagtacctcgccgac
gccaatgaggcggagtcgtggatgcgcgagaaggagcccatcgtcggcagcgacgactac
ggcaaggacgaggactcgacggaggcgctgctgaagaagcacgaggccatcatggccgac
ctggaggccttcgagaatacgattcgaaatctgcgcggccaggcgcagtcctgtcgccag
caggaggcgccctccggagagtacgtgcccggccgcgaggcagtggtggcgctgtacgac
tatgcggagaagtcgccgcgcgaggtgtcgatgaagaagggcgacgtgctgacgctgctg
aacgcctccaacaaggactggtggaaggtggaggtgaacgaccgccagggatttgtgccc
gccgcctatgtgcgccgagtggatgagagcctctccgccagccgccagcacctgctcagc
cagaactccctctcggcgcgacagacgcagattgaggcgcagtacgagtcgctgctgcag
ctgggcagagagcgaaagcgcaagctggaggaggcctgccgcggctaccagctgattcgc
gaggccgccgagctcacccagtgggtgaaggacaaggagcaggtggcctcggtgggcgag
gtcggcgaggacctggagcacgtcgaggtgctgcagaagaagttcgacgactttctctcc
gacctcaagtcgaatgaggtccgcctgacggagatgaaccagatggcgaatcagctggcc
gacctggggcagacagaggcggccaacaagatcaaccgacaggtggaggagctcaatcag
aagtgggtgcacctccaggagatgacctccagtcgggagcagcagctggcgtccgcacat
gaggtgcagcgtttccaccgggacattgacgagacgaaggactggatcagggagaaggac
gaggcgctggacactgacgacgagggcagcgacctgcgctcggtgcagacgctgcagcgc
aagcacgagggcctggagcgggacctggaggcgctctacgagaaggtgaagcagctggac
aagacggcggccaacattgagcaccgccacccggagtcggcggagcagacgcgcgagaag
cagacggagatcatcgaggagtggaacaagctgcgcatcaaggccaatgagcgccgcgtg
aagctctccaactcgtacgagctgcagcgctttctcaacgaccacagcgacctgatgctg
tggatcaactcgatgagcagtctggtgtcctcggacgagctggccagtgacaccatcggc
gcggaggcgctgctggagcgccacggcgagctgtggacggagattcacgcccggcggacc
aactacaacaccatcgaggagttcggccagcggctgattcgcaaccagcactacgccgcc
gatctggtgaaggagaagctgggcgccctttaccacgccttccaggacctagagcgcgcc
tggacggagcgcaatgaaaagctgcgccagtgcctcgacctgcagctcttctaccgcgag
tgcgagcaggcggagagctggatggccaaccgggagtccttcctcacctcgcccgacgac
gacgacaacgtcgacatactgatcaagaagcacgaggacctcaacaaggccattcgcatt
caggaggagaagattgagaatctgaaacggctggcggacaacctggtggagaacaacaac
tacgcgaaggagtcgattgaggacaagcgcgaccaggtgctggagcggtggaatctgctg
aaggaggcgctcattgagaagcgcagcaagctgggcgacacgcagacgctgcagcagttc
tcccgtgacgccgacgagatcgagaagtggatcactgagaagatgcagatggcaatggac
gagtcgtacaaggacccgaccaacattcagtcgaagcaccagaagcaccaggccttcgag
gcggagctgagcgccaaccaggagcgcatccagcagatactcgccatgggcgacaatctg
atcgacaaggataagtgctcgggcagcgacgatgccgttcgccagcggctgacgatcatc
accgagcagtggaagtacctgacggagaagaccaccgagaagtcggtgaagctgaaggag
gcgaataagcagcgctcctacaatgccgccatcaaggacattgacttctggctgggcgag
gtggagtcactgctcaagtcggaggacgtcggcaaggacctcaactcagtgcaaaatctg
atcaagaagcaccaactggtggaagcggacatcatcgcccacgaggaccgcgtcaaggac
atgaacgtgctggcggactcgttgattgacgccggccagtttgacaccaacgtcatccag
gagcgacgcgcctccatcaacgagcgctacgagcgcattcgcacgctggccacctaccga
cgaaatcggctgaatgaggcgaacacgctgcaccagttcttccgcgacattgccgacgag
gagtcgtggatcaaggagaagaagctactggtctcctccgacgactacggccgcgacctg
accggcgtgaagaacctccacaagaagcacaagcgcttcgagaatgaactggccgcccac
gagccgaccatccaggcggtacaggaggccggccagaagctgatgctcgagtcgaatctg
ggc
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integrated database retrieval system
