Rhagoletis zephyria (snowberry fruit fly): 108374001
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Entry
108374001 CDS
T08513
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04140
Autophagy - animal
rze04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108374001
04148 Efferocytosis
108374001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108374001
Membrane trafficking [BR:
rze04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108374001
Hops complex
108374001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
108374001
NCBI-ProteinID:
XP_017485438
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
DB search
MPIMYNTGDWFVLRPDTYRKLDLFTPDWPLDVDLEYMKVVGAPFGGPLAVMRDPKQIIPV
KGSVKPTIRIFDTAGLELGKIMWNHGKLINMGWSDMEELICVQDDALVFIYDMFGNEKDS
YSMGQEASLTKIVDAKIFQSTSGTGIAVLTTTGRIFLKLNNAKDVRTRQLPEIPKSVSEC
TCWEIITEERNTYCLLGRDQEIIKLFPGESVGTIKRNLFDRPFERILLMSVSYNHQNLAL
YTNNGLLWLGSVDMNKKYCEFDTGRKDIPRQIEWVMSSENHQADAVVISYPSFLLVVNRN
GDKNLFTYDPAIFLVAEMDGVRIITNNAHEMIQKLPKCVQNIFAVNSQEPSSFLFEAQKK
YQEKSHQADEYLSLFRNKMDIAVDECIEAAGYEFCTETQKSLLRTAYFGKGFIPSHNPDE
YMRILRILRVLNALRHEKIAMPLTYKQFCHLKPEVVLGRLVFRKHYAIAIQVAKHLKLPE
SWILEHWAYHKVVNDKNDNEVARKITEKFKNPSVQGISFCNIAEKAHDVGRDELAIKLLE
LEPRASLQVPLLLKLGKYDRAIRSATQSGDTELVATVLLEIKKKMMLANFNIIIREYPMA
LNIYKKMMNEWSRTALYDIYNQEDDQKSIAEYHFRNALESDSLESNLPIIANSYTQGRKH
VEAELCADTGKILKMQKNVLTPKYSKVHQISFNGLSIHDTMLLLLQIGELKEAEKIKNDF
KVPDKRFWWLRIITLSEKYKWDDLEKFAKSKKSPIGYEPFVEMCLQQNNLHEARKYIMKC
RDDRKAHWYLRAELWDEAADSAFEQRDMNTLYAVQNKASANGNRMLLEKISSYIAQLASK
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgccgattatgtataacacgggcgattggttcgtcctacgcccggatacgtatagaaaa
ttggacctttttactcccgactggccactggatgtggacttggagtacatgaaagttgtg
ggcgcaccgtttggtggaccattagccgtgatgcgagatccaaagcaaattataccagtt
aaaggtagtgtcaaacccacgatacgcatattcgacacagccggtctggagttgggcaaa
atcatgtggaaccacggcaaactaattaatatgggctggtcagatatggaggagcttatt
tgtgtccaagatgatgcattagtatttatttatgacatgtttggcaacgaaaaggactca
tacagtatgggccaagaggctagtttaaccaagattgtggatgctaaaatatttcaatcc
acttccggtaccggcatagccgtgcttacaacaaccggacgcatattcttgaaactcaat
aacgcgaaagacgttcgtacacgacagcttccagaaattccaaaatccgtgtcagaatgc
acttgttgggaaataatcacagaagaacgaaacacatattgtttgttgggtcgtgatcaa
gaaattattaaattattccctggcgagtccgtgggcacgattaaacgaaatctctttgac
cgacctttcgaacgcatactactcatgtcagtgtcttacaatcatcaaaatctagcgttg
tatacaaataatgggctcctatggctaggctcagtagatatgaataaaaaatattgtgaa
tttgacacaggaagaaaagatattccacggcaaattgaatgggttatgagctctgagaac
catcaggctgatgctgtagtcatatcctatccttcattcctattagttgttaaccgcaat
ggcgataaaaatctgttcacctatgatccagcaatttttctcgtggccgaaatggatggt
gtacgaattataactaacaacgcacatgaaatgattcaaaagttgccgaagtgtgtacaa
aatatatttgcggtaaacagccaagaaccttccagctttttatttgaggcacaaaagaaa
taccaggaaaaatcacaccaagctgatgaatatttgagtttgtttcgcaacaaaatggac
atagcagtcgacgaatgcatcgaagcagcaggttatgaattctgcacggagacacaaaag
agcctgttacgtactgcgtactttggcaaaggtttcattccttcacacaatcctgatgaa
tacatgcggatactcagaatactacgcgtgcttaatgctttacgtcatgaaaaaattgca
atgccattgacttataaacaattttgtcatctgaaaccggaagttgtgctaggccgccta
gtctttcggaaacattatgccattgcaatacaggtagcaaaacacctgaaattaccagag
tcgtggattttagaacactgggcttaccacaaagttgtaaatgacaaaaacgataatgag
gttgcgcgaaaaattaccgaaaaattcaaaaatccttcagtgcaagggatctctttttgt
aacatcgctgaaaaggcgcatgatgtgggacgcgatgaacttgctataaaactgcttgaa
ctggaacctcgcgcatcattgcaagtgccgctattgctaaaattgggcaagtatgaccgc
gccattagaagtgccacgcaatctggggatacggagctggtggctactgtgctattggag
attaaaaagaaaatgatgcttgcaaattttaatataattatacgcgaatatcctatggct
ttaaatatctacaagaaaatgatgaacgaatggagtcggactgcgctgtatgatatctac
aatcaagaggatgaccaaaaatccattgccgagtaccatttccgcaatgcactcgagagc
gatagcttagagtcaaatctgcctatcatagccaatagttatacacaggggcgaaagcat
gtcgaggctgaattgtgtgctgacacaggaaaaatattgaaaatgcaaaagaatgtatta
actcccaaatacagcaaggtgcatcaaatcagcttcaatggtctctccatacatgacacg
atgctactgttgctacagattggagagctcaaagaagcggaaaagatcaaaaatgacttc
aaggtaccagataagcgcttttggtggttgcgcattataaccttgtctgaaaaatacaaa
tgggatgacttggagaaatttgcaaaaagtaaaaaaagtcccattggttatgagccgttt
gtagaaatgtgtctacagcaaaataatttgcatgaggcacgcaaatacattatgaaatgt
cgggacgatcggaaggcgcattggtatttacgtgcagaattatgggatgaagctgcggat
agcgcatttgaacaacgtgatatgaacacattatatgccgtacaaaataaagcaagtgcg
aatggtaatcgcatgctattagagaaaatcagctcgtatattgcgcagttggcttcaaaa
aaataa
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