Rhagoletis zephyria (snowberry fruit fly): 108374142
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Entry
108374142 CDS
T08513
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04140
Autophagy - animal
rze04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108374142
04148 Efferocytosis
108374142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108374142
Membrane trafficking [BR:
rze04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
108374142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
zf-RING_Vps41
zf_RING_Vps8
WD40_WDHD1_1st
WD40_Prp19
TPR_7
WD40_CDC20-Fz
Beta-prop_HPS5
Vps39_1
zf_RING_Vps8_fungal
zf-RING_11
WD40
zf-RING_5
Beta-prop_EML_2
STE
Beta-prop_WDR19_2nd
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
108374142
NCBI-ProteinID:
XP_017485602
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MAEQEPVNNSDTETESAEDEIEPKFKYQRIANDLRKILNSDVVTCSAVHPKFLMFGTFLG
RIYIFDHQGNSVTSHLSDAPTDFSHTVAVNHMDVDAKAEYVATCSDDGKVNITGLFSDEN
NQNLNFAKSIKAIALDPDPKTPAGKRFVVGDDKLTLYEKNFLKKLKTTVLSSAEGYVLSV
CWNGTFIAWASYLGVRVYDLNEKCSLGLMKWEEPANSRLENFRCNFRWSNATTLLIGWVD
TIRICVIRRRNSIEVASRDLPGFIVDPISTFQTTFHISGLAPLTSNQLVVLGCPKEKDAE
RKSLRPVLCVMEYKLNSSEEICTDSLSLRGYQEYTVNDYSLGCIIEENRYFIVAPKDIVV
ASLYETDDRVKWLVDHRKFEEAMEVISTHGGSWSLLSVAKLYINHLLAMNKFDDAAKLCL
RVLGNKKSLWEEEVFKFVRCQQLRSVSAYLPTSDDCKLDPHVYEMVLYEYLKFDVKGFLN
LIKEWPSHLYNCTAVINAIHDNFRKQNANELLEALAILYLHQRDYESALRMYLKLQNSDV
FEMIRRYNLYDAIHKMIIPLLQLDRERAFKVLFERNKISPEIVVQQLEQNQEYLYWYLDA
LDKVDKSGKYHWKLVKLYAKYEPEKLLPFLKRSNHYPMQEALDVCKRELFYPEMVYLLGQ
MGNTTEALNIIIEKIKDIEMAIEFCKEHNDSDLWNILIDESVKEPAIVLKLLDGIVDYVD
PVAVVEKIKLGQKIPGLRDAVVKLLWDYRLQVEIRKTAQEIQLQYYYDQHARVVNTQNRG
RCVSSSEHCLKCNRSVLSMNANIAPLNDVVVFLCGHVYHSKCVPGGIEDEHCEFCNPSDF
NKDDDFALLLQ
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcaagagcctgttaacaatagcgacacagaaaccgaaagtgctgaggatgaa
attgaaccaaaatttaagtatcaacgtattgccaatgacctgcgaaaaattctcaactca
gatgttgtcacctgtagtgcagtgcacccgaagtttttgatgtttggcacgtttttgggc
cgtatctatatattcgatcaccaaggcaattccgtgacttcacatctttcagatgctcca
accgatttttcacatactgtcgccgtcaatcacatggatgtagacgccaaggcagaatac
gtggccacttgctctgatgacggcaaggtaaatataaccggcctattcagtgatgaaaat
aatcagaacttgaacttcgcgaaatcgataaaagcaatagctttagatccagatcccaag
acacctgctggaaaacggtttgttgtaggcgatgataagttaacgctgtatgaaaagaat
tttctcaagaaattaaagacaaccgtgttatccagcgctgagggatatgtattatcagtt
tgctggaatggtaccttcattgcatgggccagctatctaggggtgcgggtctatgatcta
aatgaaaagtgttcattaggtctaatgaagtgggaagaaccagcaaactcccgcttagag
aatttccgttgtaatttccgctggtcaaatgcaacaactttgcttataggctgggtggat
acaatacggatctgtgtcatacggagacgaaattctattgaagtagcttcacgagatttg
cccggtttcatcgtagacccgatttcaacatttcaaacaaccttccacatatccggcttg
gcgccactcacatccaatcaattggtcgtattgggttgtccaaaggaaaaagatgcggaa
cgtaaatcactgagaccggtgctttgtgttatggagtataagttgaattccagcgaagag
atttgcactgatagtctgtcattgcgtggatatcaagaatatacagttaatgattacagt
ttaggatgtattattgaggaaaatcgttatttcattgttgcaccaaaggatatagtcgtt
gcaagtctttacgaaacggatgatagggtcaaatggctagttgaccatcgcaaatttgaa
gaagcaatggaagttatatcaacacacggcggaagctggtcgttactatctgtagccaag
ctgtatataaatcacctactcgcgatgaataaattcgacgatgctgctaaattatgtcta
cgtgttttgggcaacaaaaaatctctttgggaggaggaagtgttcaaatttgtgagatgc
caacagttgcgttcggttagcgcttatctacctacctccgacgactgtaagcttgaccct
catgtatacgagatggtgctatatgagtatttaaaatttgatgtcaagggatttttgaat
ctcataaaagaatggccatctcatttatataattgcacggcagtcataaacgcaatacac
gacaattttcgaaaacagaatgcgaatgagttattagaggcactagcaatactctatttg
catcagcgtgactatgaaagtgcattgagaatgtacttgaaattacaaaactctgatgta
ttcgaaatgattcggcgttataatctctatgatgctatacataaaatgattataccactg
cttcaactggatcgtgagcgtgcctttaaagttttattcgaacgaaacaaaatatcaccg
gaaattgttgtacagcaattggagcaaaatcaagagtatttatattggtatttggatgct
ttggacaaagtcgacaaaagtggtaaataccattggaaactggtgaagttgtatgcaaaa
tacgaaccagaaaagttgctaccatttctaaaacgatccaatcactatcccatgcaagag
gctttggatgtatgtaaacgtgaattattttaccctgaaatggtatatttgttgggccaa
atgggtaataccacggaggcgttaaatattatcattgagaagataaaagatattgaaatg
gcaattgaattctgtaaggagcacaatgattcggatttgtggaatatactgatcgatgaa
tcagtgaaggagcccgccattgtactcaaactcctggacggtatagtagattacgttgat
cctgtcgcagttgttgaaaaaattaaacttggccaaaaaatacccggtcttcgcgatgct
gtagttaagcttttgtgggactatcgtttacaggtggaaattcgtaaaaccgcgcaagag
attcaactacaatactattatgaccaacatgctagagtagttaatacgcaaaatcggggc
cgttgcgtgtcatcttctgagcattgcttaaaatgtaatcgttctgtacttagcatgaac
gcaaacattgcgcctctaaatgatgttgttgtattcttatgtggtcatgtctaccattct
aagtgtgttcccggcggcatcgaggatgaacactgcgaattttgcaatcccagcgatttt
aataaagatgacgactttgcactgctcttgcaatag
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