Rhagoletis zephyria (snowberry fruit fly): 108374159
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Entry
108374159 CDS
T08513
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 homolog
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rze03036
]
108374159
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108374159
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HHH_3
DUF4930
HHH_6
YuzC
DUF4164
Motif
Other DBs
NCBI-GeneID:
108374159
NCBI-ProteinID:
XP_017485620
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MATVEELKIDDMSEAEVKPPPVKTTSLASDLRQFRLNKSSPSAGKTERVPGKKRIQVMAD
SDSDGAADNQTPKKVKIELSVKEKEDRYLAAVKLAPDYDAMEIQDSLVRNGWNVSEGLRY
LKEHFKTKSNSYANKTYAGNNARTSTSSSKPTQNGSSSRSKSQAQNYSDCDDSDDEVRAS
TDQVYDSEESDTESSNVMTGQRKKVFDFMNKATLMELSTVKMLSEKKASLIIELRPFKDW
KDLLKKLDSNKALSADLLNLAQELINKQNNVANILKKCNTMVKRLEAAIETGAGIVEQPK
LLNSKMKLADYQMIGLNWLTVMHNQKMNGILADEMGLGKTIQVIAFLAYLKENNLSKGAH
LIVVPSSTLDNWEAEISKWCPILVVEKYYGNQDERRRMRVRFAKDGFSGFDVLLTTYHIV
SSTPEECKMFRVCRLHYVIFDEAHMLKNMTTLRYANLIKINAEMRILLTGTPLQNNLLEL
MSLLCFVMPSFFAKSIEDIKSLFAKKAKAEGADKDASEFQETQVARAKRIMKPFVLRRLK
KDVLNNLPKKESFVIKVPMTETQKQHYHELVEYYSNRKGEICSGDRAGIAIMMDMRKTAN
HPLLMRHYFSDETLQNISERLACAPSLKKNNPQYIFEELAVMSDFQVQQFCHKHDLYDIS
IPPSLICDSGKFQHLDTLLPKLKEGGHRVLIFSQFTMMLDIMEQYLKIRRHGYFRLDGST
AVDERQDMINDFNADSGVFIFLLSTKAGGIGINLTAADTCIIHDIDFNPYNDKQAEDRCH
RMGQTRPVTIYRLISESTIEEGMQLVADEKLKLEKEITEIEKGEIQEQKCVARLLTMALG
LDKDEEERLNNSMNHSLSPSQ
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagttgaggagttgaaaattgatgatatgtcagaggctgaggtgaagccgccg
ccagtaaagaccacgagtctagccagtgatttgcggcagtttcgcctaaacaaatcttct
ccctcagctggaaaaacagagcgcgttcctggcaagaaacgtatacaggtaatggcggat
agcgatagcgatggtgcagctgacaaccaaacgccaaaaaaggtaaagattgagttatct
gtgaaggagaaagaagacaggtacttggctgcggttaaactagcacctgattacgatgct
atggaaatacaagattcgctggtgcgtaacggctggaacgtttccgaaggattacgttat
ctaaaagaacactttaagacaaaatcaaattcatatgcaaataaaacatatgcagggaat
aatgcccgcacaagtaccagcagtagtaaacccacgcaaaatggcagctcttctcgttcc
aaatcacaagcacaaaactattccgattgcgatgactcggacgatgaagtccgtgcatca
accgatcaagtatacgacagcgaagagagtgatactgaatcgtcgaacgtaatgacagga
cagcgaaaaaaagtgtttgatttcatgaacaaagcaacattgatggaattatcaacggtc
aaaatgttgtccgaaaagaaggcatccctaattatagaactgcgtccatttaaggattgg
aaggatttactaaaaaagctggattccaataaagcgctctcagcagatttgttaaatttg
gcacaagaattgattaacaaacaaaataatgttgctaatatattaaagaaatgtaacaca
atggttaaacgtttggaagcagctattgaaactggcgcaggcatagtggaacagccgaaa
ctacttaatagcaaaatgaaattggccgattaccaaatgattggcctcaattggttgacg
gtaatgcataaccaaaaaatgaatggtattcttgccgatgagatgggtttaggcaaaact
atacaagttattgcatttttggcttaccttaaagagaacaatttatccaaaggcgcacat
ttaattgttgtgccatcttccacgctggacaattgggaagctgaaataagcaaatggtgt
ccaattttggtggtggaaaaatattatggcaatcaagatgaacgacggcggatgcgcgta
cgttttgccaaagatggcttttcaggtttcgatgtattgctgacaacttaccatatagtc
agctcaacgccagaagagtgcaaaatgtttcgtgtttgccgattacattatgtgattttt
gacgaggcacacatgttgaaaaatatgacaacactacgctatgccaatttaataaaaatt
aatgctgaaatgcgcattttactcactggtacacctttacaaaataatctactcgaatta
atgtcattactatgttttgtaatgccgtcattctttgccaaaagcattgaagatataaag
agtcttttcgcaaagaaagccaaagccgaaggcgctgataaagatgcatctgagttccag
gaaacacaagttgcacgcgccaaacgtattatgaagccttttgtgctgagacgtctcaaa
aaggacgtacttaataacttgcccaaaaaagagtccttcgtaatcaaagtaccgatgact
gaaacacaaaaacaacattaccatgaattagtcgaatactactcaaatcgaaagggcgag
atttgcagcggcgatcgggcaggtatagctataatgatggatatgcgtaaaactgccaac
catccactcttgatgcgccactatttcagtgacgaaacattacagaacatttcagagcgt
ttagcatgtgcgccgtcacttaagaaaaacaatccacaatatatattcgaagaactggct
gtaatgtcagacttccaagtgcagcaattttgtcataagcacgatttatatgatatatcc
ataccgcccagcttaatctgcgattctggcaaatttcaacacctcgatacactattgcct
aaattgaaagaagggggtcatcgcgttttaattttcagtcaattcacgatgatgttggat
ataatggaacaatacttaaagataagaagacatggctattttcgcttagatggttctacg
gcagttgacgaacgacaagacatgataaatgatttcaatgcagactctggtgtatttata
tttttactatcgactaaagctggtggcattggcataaatctgacggcagcggacacttgt
atcatacatgacattgattttaatccgtacaatgataaacaagctgaagatcgttgtcat
cgtatgggacaaacacgtccagttaccatatatcgactgatctctgaaagcactattgaa
gagggcatgcaattggtagcagatgaaaagctaaaattggaaaaagaaattactgaaatc
gaaaagggagaaatacaggaacaaaaatgtgttgcaaggctactaactatggcacttgga
ttagataaagatgaggaggaacgtctaaataattccatgaatcactctttgagtccatcc
cagtaa
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