KEGG   Rhagoletis zephyria (snowberry fruit fly): 108374218
Entry
108374218         CDS       T08513                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108374218
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rze03041]
    108374218
   03036 Chromosome and associated proteins [BR:rze03036]
    108374218
Spliceosome [BR:rze03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    108374218
 Complex B
    108374218
 Complex C
   U2 SnRNP specific factors
    108374218
Chromosome and associated proteins [BR:rze03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    108374218
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT Htt_N-HEAT_1 HEAT_2 HEAT_ECM29 XMAP215_CLASP_TOG UME Cnd1 mTOR_dom CEP104-like_TOG HEAT_Maestro DUF6158 DUF2298 Glu_syn_central
Other DBs
NCBI-GeneID: 108374218
NCBI-ProteinID: XP_017485684
LinkDB
Position
Unknown
AA seq 1305 aa
MSQPAKTREEIEQQVLEFQKKAAQNAANGDGDDDEGRISLSKANMDSDIYGDGRRSNEYH
SSIPANDDADYDDEDTENTNESSSADTYSAYKKQINAFNAPKNYLQDVVDDNHDPLAEQR
VARVADREDEYRRRFRNRQLSPERIDVFADGGKTPDPSARTYKTIIKETALSNEEAELKK
KLSEKAKAGELKAVSTPASSSRRRRWDAAPSPADEEPAAKKIAYHEAATPAIPGRWDQTP
GHFSEGPQAPQQWEPTPIHPSQAATPGHETPAARGSQRRNRWDETPKTEREVAAGSLSSW
AETPRVDRISDDAVSDTPSASKRRSRWDETPSATPSITSTPMMTPSGATPLGPKAMGLAT
PTPGHMVAMTPEQAQAFRWEREIDERNRPFSDDELDALFPPGYKVLAPPPGYQPIRTPAR
KLMATPTPMVGAAGSGFFMQKEDPTSTTGVGSKMMMDLEPKGQNLPPLKPDDLQYFDKLL
NEVDEEALSPDEQKERKIMKLLLKIKNGTPPMRKSALRQITDKAREFGAGPLFNQILPLL
MSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISN
LAKAAGLATMISTMRPDIDNVDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQ
ARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTITALALAALAEAATPY
GIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMFILIREFQS
PDEEMKKIVLKVVKQCCGTDGVEPQYIKEEVLPHFFRHFWNHRMALDRRNYRQLVDTTVE
IANKVEAAEIITRIVDDLKDENEAYRKMVMETIEKIMSNLGASQIDSRLEEQLIDGILYA
FQEQTTEDMVMLNGFGTIVSTLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISKIA
VVMKTCNEEKLMSHMGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMDKMTPPIKDLLPR
LTPILKNRHEKVQENCIDLVGRIADRGAEFVSAREWMRICFELLELLKAHKKAIRRAAVN
TFGYIAKAIGPHDVLATLLNNLRVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVP
ELNVQNGVLKSLSFLFEYIGEMAKDYIYAVTPLLEDALMDRDLVHRQTACSVIQHMALGV
YGFGCEDALTHLLNFVWPNIFETSPHLVQAFMGAIEGFKVSLGPIKMLQYTLQGLFHPAR
KVRDVYWKVYNTLYIGAQDSLVAGYPRSPNDKTNNYIRTELDYVL
NT seq 3918 nt   +upstreamnt  +downstreamnt
atgtctcagccagctaaaacgcgggaagaaattgagcagcaagttttggagttccagaag
aaagctgctcaaaatgcagctaatggtgacggtgacgatgatgaaggccggatatctctt
tccaaggctaatatggacagtgatatttacggtgatggccgaagaagcaatgagtatcac
agctccattccggccaatgacgatgccgactatgacgatgaagacactgaaaacaccaat
gagtcgtcttcggccgatacatacagtgcgtacaagaagcaaatcaatgcatttaatgct
ccgaaaaactatcttcaagatgttgtcgatgataatcatgatcctctagctgaacagcga
gttgctcgagtagcagatcgtgaagatgaatatcgacgtcgctttcgaaatcgacaattg
tctccagagcgtattgatgttttcgctgatggcggaaaaacaccagatccatctgctagg
acttacaaaacgatcattaaagaaactgctctcagcaatgaagaggctgaacttaagaaa
aagttgagcgaaaaagccaaagctggtgagctgaaagcagtttctacgcctgcttcatct
tcaaggcgacgacgctgggatgctgcaccatctccagctgatgaagagccggctgcgaaa
aagattgcatatcatgaagcggccactcctgccattcctggtcgttgggatcaaactcct
ggccacttttctgaagggcctcaagctccacagcagtgggaaccaactccaattcatcca
agtcaggcggcaacgcctggtcatgaaactcctgcagcgagaggcagtcagcgtcgcaat
cgctgggatgaaacgccgaaaactgagcgcgaagttgctgctggttctctttcgagttgg
gcagagacccctcgtgtggatcgcatttccgatgatgccgtttcagacacgcccagtgcc
tccaagcggcgatctcgatgggacgaaacaccttcggcaacgccatcaatcacatcaact
ccaatgatgactccttctggggcgactccgctcggacccaaagcaatgggtcttgccact
ccaacccccggacatatggtggccatgacgcctgaacaggcgcaagcatttcgctgggag
cgtgaaatcgacgaacgtaatcgacccttctcggatgatgaactggacgcactgttccct
cctggttacaaagttctggctcctcctcctggatatcagccgattcgaacgccagctaga
aagcttatggctactccaacaccgatggtcggcgcagctggtagcgggttcttcatgcaa
aaggaagatcccactagtacaacaggcgtgggctctaaaatgatgatggatttggaacca
aaggggcaaaatttgccgccgcttaaaccggatgatctgcagtactttgacaaactgctc
aatgaagttgatgaggaagcactgagccctgatgaacagaaggagcgaaaaatcatgaag
ctactgctgaagattaagaatggcactccgccaatgcgaaaatccgcccttcgtcagatc
acagacaaagctcgcgagtttggagccggtccactgtttaatcaaattttgccactctta
atgtcccccacattggaagatcaagagcgacatttactggtgaaggtcattgatcgaatt
ctctacaaacttgacgacctcgttcgaccttatgtgcacaaaattctagtcgttattgag
ccgttgctgattgacgaagattactatgctcgtgtggagggtcgtgaaatcatttcaaac
ttggccaaagctgctggtcttgctaccatgatttctactatgcgtcccgatattgacaat
gtcgacgagtatgtgcgaaacaccacagcccgtgcttttgctgttgtcgcttcggctctg
ggcattccctccctcctgccctttctcaaagctgtctgcaaaagtaagaagtcatggcaa
gcccgacatactggcatcaaaattgttcagcaaattgccatcctcatggggtgtgccatt
ttgccgcaccttcgcagtttggtcgagatcatcgagcatggccttgtggacgaacagcaa
aaagtgcgcactatcaccgctcttgcactggctgccctcgctgaagcagcaactccctat
ggcattgaatcatttgactcggtgttgaagcctctctggaaaggcatcagaacgcaccga
ggaaagggattggctgcatttctgaaagccatcggctatcttattccactcatggacgcc
gaatatgccaattactacacgcgggaagttatgtttattcttattcgtgagtttcagtcg
cctgacgaagaaatgaagaaaattgtcttgaaagtggtgaagcagtgctgtggcactgac
ggtgtcgagcctcagtacatcaaagaagaggtgttgcctcactttttccgtcatttctgg
aatcatcgaatggctcttgaccgacgcaactatcgtcaactggtggatactacggtggag
attgccaacaaagtggaagcggcagagattatcactcgcattgtcgacgacctaaaggat
gaaaatgaggcgtatcgtaagatggtcatggagacaattgaaaagatcatgtccaacttg
ggtgcctcgcaaattgattcccgtcttgaagaacagcttatcgatggcattttgtatgcc
tttcaggagcagacaaccgaagatatggtcatgctgaatggtttcgggactattgtgagc
acacttggaaagcgcgtaaagccttatttgcctcaaatatgcggtactattctgtggcgc
ctgaacaacaagtctgctaaagttcgccagcaagcggctgatctgatttcaaagatagcc
gttgttatgaagacctgcaatgaggagaaactgatgagtcatatgggagtggtgctttat
gagtaccttggcgaggagtaccctgaagtgttgggttccattctgggagctcttaaggca
atcgtcaatgttattggcatggacaaaatgacgccgcctattaaagatctacttcctcgt
ctgacgcccattctgaagaatcgacacgaaaaggtacaggagaactgcatcgatttggtt
ggacgtattgctgatcgaggtgcagagtttgtatcagcacgcgaatggatgcgtatctgc
tttgagttgctcgagttgctgaaggctcacaaaaaagccattcgtcgtgctgcggtgaac
acctttggatacattgccaaggccattggtcctcatgatgtcctggctacccttctcaac
aacctgcgtgtacaagaacgacagaaccgagtgtgcaccactgtagccattgctattgtc
gccgagacttgttctccttttaccgtcttgcccgctctcatgaacgagtaccgagttcct
gagctgaacgtccagaatggtgttctcaagtcactctctttcctctttgagtacattggc
gaaatggccaaggactacatctatgctgtaacgcctcttttggaagacgctctcatggac
agagatttggttcatcgtcaaacagcttgctctgtgattcaacacatggcactcggcgtg
tacggcttcggttgtgaggacgctctcactcaccttctcaactttgtttggccgaatata
tttgaaacttctccacatttggtgcaggcatttatgggcgctattgagggttttaaagta
tctcttggccctattaaaatgttgcagtacacattgcaagggctttttcatccagctcgg
aaggtccgtgatgtttattggaaagtttacaacacgctgtatattggagcccaagattct
ctggtagccggatatccgcgatcacccaacgataaaaccaataattacattcgcactgaa
ttggattatgttctgtag

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