Rhagoletis zephyria (snowberry fruit fly): 108374255
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Entry
108374255 CDS
T08513
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108374255
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rze01009
]
108374255
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108374255
03029 Mitochondrial biogenesis [BR:
rze03029
]
108374255
Protein phosphatases and associated proteins [BR:
rze01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108374255
Membrane trafficking [BR:
rze04131
]
Autophagy
Autophagosome formation proteins
ULK complex
108374255
Mitochondrial biogenesis [BR:
rze03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108374255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
ubiquitin
DUF4164
Motif
Other DBs
NCBI-GeneID:
108374255
NCBI-ProteinID:
XP_017485725
LinkDB
All DBs
Position
Unknown
AA seq
1404 aa
AA seq
DB search
MMLYVFHVDVGRMMSFDMTVALSSVENLKDTIERLHGIPAANIVLLVSGGEMLAPNTQVS
YYSAGTDTNPIYMFLTGEPRTPPPLQPSEPDRDLSEQVERCKQLPPIYSSVEKRAQLALK
MYEYARDEERLSERLVHEQHLQQQGWSAVVANMEDLIDEFRSRFKNFCSAFDRHLENRDN
YLELLNNFNDDLTMLARIPILPGLMPLAEEDFHGFDEFLEPDDVFSRSHSTQESVLVAGG
VPAQQAASGGQAVATDVGREDNATSDDKSSTSPNKKLKMGTDSVDDTTTTAVAVTVTKTT
TTTTTLMAVVNHQSSSSNSTRPKLNLLQWITSKENQNRLIIMCDECVQGLGTFDKDVYAQ
LKNEVQHILKQAEQPDVKEIKGLSDRLCKLEDFKYKVKRMVLDQKELSTAFQQNQSRVNN
LRDPSILPDLCDSHQSQLAVMVGNHQKIREHRRIIARAKDELGVNLHMRLNRIVHVENSM
SEFDNRLLFYLRCLRRAERHIQIIEQIHQAPCIYVAAVTEVVRRKIFSGEFRLWASKLAE
DFDIIHSEEIKRRQQFNANFDGHFLNILFPGMNDMPPAFANETPLLFDARLPNITKSDID
VLSSHLPDLAPEIQLPDMGPVINFFVSRSGPHQKERMEELLRHQVAAVLGGSLSVEVASS
AMSTGEKPLQHPRLGELQKIGVGCEGSETDTEAEFEKLPVTADEVAESEAPMFTTQATST
IVIETVARSAATSILLMQSAETLTDETESSARAEVERLRGILSAMYKLSSECIRLSRADL
EHCRTETATYREDLQSELQMLHDQWNLIRMQSEQREQQLLQTKELLNDTVQQHNSELAIL
RQQLCDTEVLHSKLEELKEQLNAAHMEQQRAVAAAREELLHEHKSEIESLRCRYKLMTSM
ELSPSETSLEKLERPPSNIDQNVIDRSEHEAIVSQLRTTFESEKEKAIAAAVEIERTIWQ
TKLNLNSESVMGNVNILKEMLEEKDRQLDLVRKQNLLLTKEIYQLKTRIDALTNEEGNSW
LKEKIEYLNRDKNRLEEELVTEKERSKRLEMETSFALRAPSSSHKYMLLDSCNKGDIVFI
VWSVRHNQYMVVQDSPVLYFVHGDSLLGMNLRMPLAPAPSESTIMENMLLPVPYYAIGRV
VDREYCQAKKDENRYRVSKGTRFYRIKLAPLSSMQHWIARREKIESSFCASTSTSISQCD
TSADNESSALLPTGCKALVPVSGCSLASPTQRHAQFSPNISTIEESVITTKTTTSLSSGD
VVDYTAVHMEAYDDTSAPIATTAIHTEDNNENPTTSSMGERCRYTSVSIEEDPENFETLT
STPTTMIPTPTQQLLLQTVITEQPTASGKQHGIPLITGPDNEAGEMSGCSADMKTTSYGT
ACSEDSDEYRSLEPKDETDFAISE
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgtacgtgttccatgtcgatgtgggacgcatgatgtcctttgacatgacggtg
gcactgtcttcggtcgaaaacctcaaggatactatcgagcgtcttcatggcataccggct
gcaaatattgtactgttggtcagcggcggtgagatgttggccccgaatacacaagtctct
tactattcggctggcaccgatacgaatcccatctatatgtttttgactggtgagccacgc
acgccgccgccactgcaaccgagcgagcccgatcgagatttgagcgaacaggtggagcgc
tgcaagcaactgccaccaatctattcttcggtggaaaagcgcgctcaactggcgttgaag
atgtacgagtatgcccgcgatgaggagcgtctctccgagcgtctggtgcacgagcagcac
ctgcagcagcaaggttggtcggctgttgtggccaatatggaagatctcatcgatgaattt
cggtcgcgtttcaaaaatttctgttcggcttttgatcggcatctagaaaatcgcgacaac
tatttagaattgttgaataatttcaacgatgatctgaccatgttggcacgcattcccatt
ttgcctggcttgatgcctttggctgaagaagatttccacggattcgatgagtttctggag
ccagacgatgtattctcacggtctcattcaacacaagaatcggtgctagtggcaggcggt
gtacctgcacaacaagcggctagcggtggacaagctgtagcgacagatgtaggcagagag
gataacgccacctctgatgacaaaagctcaacatcacccaacaagaaactgaaaatgggc
acagattccgttgacgatacgacgacgacggcggtggcggtgacggtgacgaaaacgaca
accacaacgaccacattgatggctgtcgtcaatcatcagagttcatctagcaacagcacg
cgccccaagctcaatctcttacagtggatcacatccaaagaaaaccaaaatcgtttgata
atcatgtgtgacgagtgtgtccaaggtcttggtaccttcgacaaggatgtttatgctcag
ctcaagaacgaagttcaacatatcctgaaacaagccgagcagcccgatgttaaggagata
aagggcttgagtgatcggctctgcaaactggaggatttcaagtataaggtcaagcgtatg
gtgctagatcaaaaggaactctccactgctttccagcaaaatcaaagtcgggtcaacaat
ttgcgagatccctccatactgccggacctttgcgattcgcatcaatcgcagttggctgta
atggttggcaaccatcagaaaatccgcgagcaccgacgcatcattgccagagcaaaagac
gagctgggcgttaatctacacatgcgcttgaatcgcattgtgcacgttgagaacagcatg
agcgagttcgataatcgactgttgttctatctgcgttgtctacgccgtgccgagcggcat
atacagatcatcgaacaaatacaccaggcgccatgcatttatgtggctgccgtaacagag
gtggtgcgtcgcaaaatcttctccggtgagtttcgtttgtgggcctctaaactcgccgaa
gacttcgatatcattcacagcgaagagatcaagcgaaggcagcaattcaatgctaatttc
gatggacacttcctgaacatactattccccggtatgaacgatatgccgcctgcttttgcc
aacgaaacacccttgcttttcgatgcgcgcttgccgaacataaccaagtctgacattgat
gtattgtcatcccacctgccagacctggctcccgagatccagctacccgacatgggacct
gtgataaattttttcgtctcacgttcgggcccgcaccaaaaggagcgcatggaagagctg
ctgcgccatcaagttgctgccgtgttaggcggctcgttgtctgtggaggtagcgtcgagt
gcaatgagtactggcgagaagccattacagcatcccagactcggcgagttgcaaaaaatc
ggcgttggctgtgagggttccgaaacggatacggaggctgaatttgagaagttgccagta
acagcagatgaggtagcggaatcagaagctccaatgttcaccacacaagcgacatctact
atagtcatagaaacagttgcgcgcagcgcagccacttcgattttgttaatgcaaagcgca
gagacgctcacagacgaaacggaatcgtctgctcgtgctgaggtagagcgtttgcgtggc
atcttaagcgctatgtataagctatcgtcggaatgcatacgcttgtcacgcgctgacttg
gaacactgccgcaccgaaaccgcgacttatcgcgaagatctccaatccgaactacaaatg
ctccacgatcagtggaatttaatacgcatgcaaagcgagcagcgcgaacagcagttgctg
caaacgaaagaactgcttaatgacacagtgcagcagcataacagtgagcttgccattttg
cgtcaacagctttgtgacacagaagtgttgcactcaaaactggaggaattaaaggaacaa
ctcaatgcagcccatatggaacagcaacgagcggtggcagcagcacgcgaagaactgctg
cacgagcataaatcggaaatcgaatccctgcgctgccgctataaactaatgacatcgatg
gagctttcgccgtccgaaacgagcttggaaaagttggagcgtccgccatccaacatcgat
cagaacgtgatcgaccgcagtgaacatgaagctattgtgtcgcaattgcgtaccacattt
gaaagtgaaaaagagaaggccatcgccgcagcagtagaaatagaacgcactatttggcaa
accaagctaaatttgaactcagaatctgtgatggggaatgtgaatatactgaaagagatg
ctcgaggagaaagatcgacagctggatctggtgcgtaagcagaatcttttgctcacaaaa
gagatctaccaattgaagactcgcatcgatgcgctcaccaatgaagagggaaacagttgg
cttaaggagaaaatagagtacttgaaccgtgacaaaaaccgactggaagaagagcttgtc
acagagaaagagcggtccaaacgcttggaaatggagacctctttcgctttaagggctcca
agttctagtcataagtacatgctgttggactcctgcaataagggtgacatcgtttttatc
gtatggagtgtgcgtcataaccagtacatggtggtgcaggactctccagttttgtatttt
gtccatggagacagcctgttgggcatgaatctgcgcatgccactcgctccggcaccaagc
gaaagtacaataatggaaaacatgctcctaccggtgccttactatgcaattgggcgtgtc
gtcgatagagagtactgtcaggccaagaaggatgaaaatcgctaccgcgtttccaaaggc
acaagattttatcgcataaagctagcgccattgtccagcatgcagcattggattgcacgt
cgcgaaaaaattgagtcatcattctgtgcatccacgtccacatcgatatcgcaatgcgat
acaagcgccgacaacgagagcagtgcattgctacccactggatgcaaagcgctcgttccc
gtgagtggctgtagtctagcctctcccacacagcgtcacgctcaattttcacccaatatt
agcacaatcgaggagagtgttataactacaaaaacaacaacatcattatcttcaggcgat
gtcgttgattacacagcagtacacatggaagcttatgacgatacttcagcaccaatcgcc
accaccgcaatacacactgaggataataatgaaaatcctaccacttcatcgatgggcgaa
cgttgtcgctatacgagcgttagcatagaagaagacccggaaaattttgaaactttaact
agcacgccaacgactatgatacccacgcctactcaacaattactgctacagactgtgata
acagagcagccaactgcatcaggtaagcagcacggcatacccttaataacaggtcccgat
aatgaggctggtgaaatgagtggctgctcagcggatatgaagacaacatcgtatggtacc
gcctgcagcgaagattcggatgagtatcgctctttggagcccaaggatgagacggacttc
gctatttctgaatag
DBGET
integrated database retrieval system
