Rhagoletis zephyria (snowberry fruit fly): 108374261
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Entry
108374261 CDS
T08513
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108374261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108374261
03036 Chromosome and associated proteins [BR:
rze03036
]
108374261
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108374261
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108374261
PBAF complex
108374261
GBAF(ncBAF) complex
108374261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
SWIRM-assoc_3
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
108374261
NCBI-ProteinID:
XP_017485731
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MEELSSEDRNERKKTPQTVRGKRRRSPSPQADKKRRSKGASARSPAPQKKKPNKNDEDSE
DQAKDVDDPSPEPPIQEVNINRNSVGNRNKDNENMPIKGGTIMDLDSNDYDDKHLNSNVN
SVEEKTSRPASPTRTENANDNVAKYDKDDGADDNVTEQANHIIIPSYASWFDYNCIHSVE
RRGLPEFFNSRNNSKTPEVYIAYRNFMVDTYRLNPTEYLTVTAVRRNIAGDVCAIMRVHA
FLEQWGLINYQVDADARPTPMGPPSTSHFHVYLDAPSGLQPLNPPRGQMSATQQMLNLPK
ENGIGKLDSEKGEAADKTDGATLKNGFNDNFGLKVDQYAKKNSFFKSKAAANLSREWTEQ
ETLLLLEGLELYKDDWNKVCEHIGSRTQDECILHFLRLPIEDPYLDNTNNALGPLSYNPI
PFSKSGNPIMSTVAFLASVVDPRVAASAAKAAMEEFSKIKDENVSDDVSASKSSETPTAI
SENTTSADATTRPASEDSTEKSAEANDAKLKKDGAEQAESTDSQKDDKEKEKEKEKDVNG
VNEEVSEVKKEITDSEKPSEPMEVDKENGGDAATEKSKEGGAEKSSEDASTTEKDSTVAT
AEKENKEKNAVKESQISVAAAAALGSAAVKARHLAVVEERKIKSLVALLVETQMKKLEIK
LRHFEELEHIMDREKETLEFQRQQLMQERQQFHMEQIRQQELRARQQAQQYYNAQHPVAN
HSAPQKEQQQQQQQPPPPSQNSGGPAAAENDASKLSRPGMPPAAQRFPNSPSVPIRPPVQ
QQLQQQQPPPPQPQQQPMQSVVPQHLTTPSQPGVALNTYTPSQSQPPQAPQIPQAPPSSA
PSTNNIIQSSPASAVPPQPSAAAVSMNPDQQVVAAPAVAAANPSQLPPQSMVPQQAAPPL
QTNNMMQTAAPLPPAPVSMSSEPQGSVAVMPSVSAPVQQSLPPSQLPPQSMVPQHLPPPP
TNNSMQNAPVQQPLPLAPPAQQQPSPPLQQQQQPPQQALPMNPGQGEGVGGVASSAPVPM
QTESPPASTTNT
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagctcggaggatcgcaacgagcgcaaaaagacgccacagacggtgcgt
ggcaagaggcggcgatcgccctcaccccaagccgacaagaagcgtcgaagcaagggtgcc
agtgctcgcagcccggctccccagaagaagaagcccaacaagaatgacgaggactcggag
gaccaggccaaggacgttgacgatccctcgcctgagccgccgattcaggaggtgaatata
aaccgcaactcagtgggcaaccgaaacaaagacaatgaaaacatgcccatcaaaggcggc
accattatggatctcgacagcaacgattacgatgacaaacatctcaactctaatgtcaac
tcggtggaagagaagacatcacgtcccgcttcgcccactcgtactgaaaatgccaatgac
aacgtggccaagtacgacaaggacgacggtgccgatgacaatgtgaccgagcaggcaaac
cacatcatcattcccagctacgcctcatggttcgactacaactgcatccactcggttgaa
cgacgcggccttccagagttcttcaacagccgtaacaactcaaaaacacccgaagtgtac
attgcctaccgcaactttatggtcgacacgtaccggctcaatcccactgagtatctgacg
gtcaccgctgttcgccgaaacattgccggcgatgtgtgtgccatcatgcgagtgcatgcc
tttctcgagcaatggggcctgatcaactaccaggtggacgctgacgctcgccctacccca
atgggtcctccatcgaccagtcatttccatgtttacctcgacgcaccgtccggcctgcag
ccactcaaccctcctcgaggacagatgtcagccacccaacagatgctgaacttgccaaag
gagaacggcatcggcaagctcgactctgaaaagggcgaggcggcggacaaaacggatggc
gccacactgaagaacggtttcaatgacaactttggactgaaagttgatcagtacgccaaa
aagaattccttctttaaaagcaaagccgcggcaaatctctcacgcgagtggactgagcag
gagacactgcttctcttggagggactggagctttacaaggacgactggaataaggtgtgc
gaacacattggcagcaggacgcaagatgagtgtattcttcactttttgaggttgcccatt
gaggatccttaccttgacaacaccaacaacgctctcggcccactgtcgtacaacccgatt
ccattctccaagtcgggaaatcccatcatgtcaactgtagcatttttagcctctgttgtt
gacccaagagttgcagcatcagcagccaaagcggcaatggaagagttttcgaaaatcaaa
gatgaaaatgtgtctgatgacgtttctgcttcaaagagctctgaaactccgactgctatc
agtgaaaacacaacatcagctgacgccaccaccagacctgcttcagaggattctacagaa
aaaagtgctgaagcaaatgacgcaaaattgaaaaaagacggcgctgagcaagcagaatca
acagacagccaaaaagatgataaagaaaaagagaaggaaaaggagaaggatgtaaacggc
gtgaatgaggaagtttctgaagttaaaaaggaaatcaccgactcagaaaagcctagcgag
ccaatggaagtggacaaggagaatggcggcgatgcagcaactgagaaaagcaaggaaggt
ggtgctgaaaagtccagtgaagatgcatcgacaacagaaaaagactcaacagtggcaaca
gctgaaaaggagaataaagagaagaatgctgtcaaagaatctcaaatttctgttgcagct
gctgccgctcttggttctgccgctgtgaaagctcgtcacttggctgtggtggaagagaga
aaaatcaagtccctagttgcactactggttgagactcagatgaagaagctagaaattaag
ctgcgtcactttgaggaattggagcacatcatggaccgtgagaaagagacgctcgaattc
caaagacagcagctaatgcaggaacgacagcagtttcacatggagcagattcgacagcag
gagttgcgcgctcgccaacaggctcagcagtattacaatgctcaacatcctgtcgccaat
cacagtgctccacaaaaagagcagcagcaacagcaacagcaaccaccaccgccttcccag
aattctggtggtcctgcagcggctgagaatgacgccagcaagctgtctcgtcctggaatg
cctcctgccgctcaaagattccccaactcgccatcagtaccgattcgaccgccagttcag
cagcaactgcagcagcagcagccacccccacctcaaccgcagcagcagccaatgcagtca
gtggtgccccagcacctgaccactccatcgcaacctggtgttgcgctgaacacttacaca
ccctcacagtcccagcccccacaagctccccaaataccgcaagccccaccctcatcagcc
ccatcaacaaataacataattcaaagctctcctgcatcagcagtaccaccacagccatca
gcagcagcagtttcaatgaatcctgatcagcaggttgtggctgctccagccgtagcagca
gcaaacccttctcagctgccgccccagtcaatggtgccccagcaagctgctcctcccctt
cagacaaataacatgatgcaaacagcggcgcctctacccccagcacctgtttcgatgagc
tccgaaccgcaaggcagtgttgcggtgatgccttcagtttcagccccggtgcaacaatct
cttccgccgtctcaactgccaccacagtcaatggtgccacagcatttaccacctcctccg
accaataactcaatgcaaaatgctcctgtacagcagccactaccactagcacctcctgca
cagcaacagccatcaccaccattgcagcaacagcagcagccgccgcagcaagcccttcca
atgaacccaggtcaaggtgaaggagttgggggagttgcctcaagtgctccagtgcccatg
caaactgagtcaccaccagcgagcaccacaaatacttag
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integrated database retrieval system
