Rhagoletis zephyria (snowberry fruit fly): 108374313
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Entry
108374313 CDS
T08513
Name
(RefSeq) zinc finger SWIM domain-containing protein 8-like
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rze04121
]
108374313
Ubiquitin system [BR:
rze04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
108374313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
Spaetzle
SWIM
Motif
Other DBs
NCBI-GeneID:
108374313
NCBI-ProteinID:
XP_017485788
LinkDB
All DBs
Position
Unknown
AA seq
2004 aa
AA seq
DB search
MTDVYSWGDSDPFEEDDSWMSEPESVCNNWRGWKKAPSGGSPAGAAGTSSGGAIVNSPAN
GAASGSAVSSLTELSSRVVATYIPFEVVQRYQPPVPEQLQLRIAFWSFPDNEEDIRLYSC
LANGSADEFQKGENFYRSRTVQNLLQIGFHLSATVVTSQTLKPCTVAVAFDRGRITSCSC
TCVCSSSWCSHVVAVCLHRIFQPTTVSLRAPITESLSRLNQTQLQKFAQYLINEFPQQIL
PTAQRLLDELLNLDSAINSVWGAPDPTAGALIHDQTKWCLDEHQLHDNIRKILIKLCIPS
PMVYSDVNYLSSTQPPAASEWTSLLRPLRGREPEGLWNLLSIVREMLRRHDRNYIPLLKI
LTEEILACGPILLWWFNTNVSLHRGYHGNNNNNRSSIHSNNHTSQHACSSLCDEIVVLWR
LVTLNPALSAQDTAFLFEQLREYHLQTLEMVISASNSGVSGARHQNGSHHQQQQQQNGSI
VKTADIEIFGGFKPAMISCLIDWTTYPISGVTNAHRNPYCPSINAASTNTSSVNHAISGT
VKMTPWSSKLTAGAAGSGSFSKQSSTESSANGGGEEEGSGTGAEIVNRRLNDSEDSGNND
NWDRVSSASGGSDEVLNRARPRAEGSIPIAQADAAAAAAVAGPSNADADYQIYVYSTAGQ
NVKSALSGSGRGGGGDSMKNYDPELLAAATVKPIEDSFEILFSRAEALYAHGYVKEACQL
SVRLAEELLNRPPVLTLENGGAPRNRFNPALHQISLLASATLSKAAFLCSVLSEHEDSHL
LAFYVGLLGLELVRPPASTKALEVKLANQEQELVNSLKRIPLCTRALAVLREKGEQLRDG
RLTSRGEALLPLILAGYIFDALVLSTGQGPVSAAYELSTVHTSFLPTAIRLPTDERLAFE
ASVAAIGLKANVSEADHPLLCEGTRRQRGDLALTLLVYYKDSKDRLNKIMDKLLDKEIHM
INRRSQSNSGGGGGGGSSFSNHNHNNNYMLNEVANTLTKLPSTQYHSGGEVLSSHSSPSR
SVQQCPNYQALETNALAAAASTSEAAQQQQQQQQATASTSTSNWDEGIKSWDAKFRRLSL
NEGSTASTSQPVNVVSSAVNGSSKVAPNTDHSSTAATGTATSSSVDSSSPPETASSDNSP
TVSRRSLFQASSSSKQQQSASDSSSSGESSDSFSSSSSTEKKCSPIHRSNLVAGSSSSST
PHHHLSPHHSISSSSVGSGLLQGAASTSAEMTYSDHHLSGTPPTIVDLTNGQSRGSTFES
FNAAYMAPNGWNGTPAATVTNSPAPTANSCGNSYSRQSMSTGSLVGGAMPKNNNNSGSTY
LQGSSHISHLKPHMRYKGKRGHYPIIPNQPSEASAHFMFELAKTVLAKAGGNNTSVLFTQ
PPSSSNGRAHRNLHMCAFQIGLYALGLHNAVSPNWLSRTYSSQVSWITAQAMEIGHQAIA
FLIDTWEGHFTPNEVASLADRASRGQEQSMVSAAAQLALSCLPHSHALTPSEIQRALIQC
KEQSTEMLERACLAVESAAQGGGVNPDVLFHVAHKWHELYDQEAIKARHQGRFEGGPMSG
GAAVPYLTGGHLHHGGAHHNGGMVHHPSVTVHAVPAPTSTSSFSHCNLTPRQLSYLHSVY
RVGMLAMETLARRVNDDRPQTKYAKNPTYCEDVKWLLVVAKKLGTSFVQDFCAYSANAIG
SPFVLLEIINEVYASFEHSTQSGPNGSSSLQPYMASIRSHMLNQLIQKCRQLHSSGYDPG
YYKGNRPYGGGSYGSYDPSYHSPQQQQQYSSGYDYVPPPPPPPSYSQSYTPYRKYYKQYL
PGPQFCPETGRTVCSKVAPFYPIDEVFSVVKMARAKRFNISSEFVDESENDPEPNLSEEP
WPEPEPFLQHSLGGHSFGGGFNVPQQPIAHFHNFDYKPYYGEKYRATVPPYHHQQRSIYA
NSYSGPHELGAYASASAVAVSHSRYKRQAGGRATELPIEPVCPSRMILIEPKAALNDKRQ
WKFVVNLSERDPRLKQAIKVEVCT
NT seq
6011 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgtctacagctggggcgacagtgatccctttgaggaggacgactcgtggatg
agcgaaccggagtcagtctgcaacaattggcgaggctggaagaaggcgcccagcggtggc
tcacctgctggtgctgctggcactagctccggcggcgctatcgtcaactcgccggcgaac
ggcgccgcgtccggcagcgccgtctcctcgcttaccgagctttcctcgcgcgtcgtcgcc
acctacatcccctttgaagtggtgcagcgctaccagccgccggtgcccgagcagctgcag
ctgcgaatcgccttctggagcttccccgacaacgaggaggacattcgcctgtacagctgc
ctcgccaatggcagcgccgatgagttccagaagggcgagaacttctaccgcagtcgaact
gtgcagaatctcctgcagattggctttcacctgagcgcaaccgtcgtcacctcccaaacc
ctcaaaccttgcactgtggcggtggctttcgatcgcggtcgcattacctcctgcagctgc
acctgtgtctgctcctcctcctggtgctcgcatgtcgtcgccgtctgcctgcaccggatc
tttcagcccaccaccgtcagcctgcgagcgcccatcaccgagtctctctcccgactgaac
cagacgcagctgcagaagttcgcccagtacctcataaacgaatttccgcagcagattctg
cccacggcgcagcgcctgctggacgagctgctcaacctggacagcgccatcaacagcgtc
tggggggcgccggacccgacggcgggcgcgctcatccacgaccagacaaagtggtgcctg
gacgagcaccagttgcacgacaacattcgcaagattctcatcaagctgtgcatcccctcg
ccgatggtctacagcgacgtgaactacctcagctcgacgcagccgccggcggccagcgag
tggaccagcctgctgcgaccactgcgcggccgcgagccggaaggcctctggaacctgctc
tcaatcgtccgggagatgctccgccgacatgaccgcaactacataccactgctaaaaata
ctcaccgaggagatactggcttgcgggcccattctcctctggtggttcaacaccaacgtc
agtctccaccggggatatcatggaaacaacaacaacaatcgcagcagtattcactcaaac
aatcacaccagtcagcacgcctgcagctcgctctgtgatgagattgtcgtcctctggcga
ctggtgacgctcaatccggcgctgtctgcccaggacacggcgtttctctttgagcagctt
cgcgagtaccacctgcagacattggaaatggtgatcagcgccagcaactcgggagtgtcc
ggcgcaagacatcagaatggaagtcatcatcagcagcagcagcagcaaaacgggtctatc
gtcaagacggctgacattgagatttttggcggatttaagccggcgatgatcagctgtctc
atcgactggacgacgtacccgatttcgggcgtcactaacgctcatcggaatccgtactgc
ccaagcattaatgccgccagcacgaacaccagctcggtaaaccatgccatcagtggcact
gtgaagatgacgccgtggtcgtccaagctgacggcgggggccgctggaagtggctcattc
agtaagcagtcatccacggagagcagcgccaatggaggcggcgaagaggagggctctggc
acgggagcagaaattgtgaatcgacgactgaatgactcggaggactcgggaaacaacgac
aactgggaccgagtcagctcggcaagtggaggcagtgatgaagtgctcaatcgcgcgagg
cccagggcagaaggaagcattcccattgctcaggcagatgcagcagctgctgctgccgtt
gcaggacccagtaatgccgacgccgactatcagatttacgtgtacagtactgccgggcag
aatgtgaagagcgcactgtcgggcagtggtcgaggtggcggtggcgactcgatgaagaac
tacgatccagagctgctggccgccgccacggtcaagccgattgaggactcatttgagatt
ctcttctcccgggcagaggccctctacgcgcacggatacgtgaaagaggcctgtcagctg
tcggttcgactcgccgaggagctgctcaatcgaccgccggtgctgacgctggagaacggc
ggcgcccctcgaaaccgcttcaacccggccctgcaccagatctccctgctcgcctctgcc
accctctccaaggcggccttcctctgctcggtgctcagtgaacacgaggactcccacctg
ctggccttctacgtgggcctgctcggcctggagctcgtccgaccgccggcctccacgaag
gcgctggaggtgaagctggccaaccaggagcaggagctggtcaactcgctgaagcgcatt
ccgctgtgcacgcgcgccctggcggtgctcagggagaagggcgaacagctgagagatggc
cggctgacgagcaggggcgaggcgctgttgccgctcattcttgccggctacatcttcgac
gcgctggtcctctccaccggccagggaccggtgtcggctgcttacgagctgagcactgtg
cacacttcctttctgccgacggctattcgcctgcccactgacgagcgactggcctttgag
gcctcggtggcggccatcggcctgaaggcgaacgtcagcgaggcggaccatccgctgctg
tgtgagggcacaaggcggcagcgaggcgacctcgcactgacgctgctcgtctactacaag
gacagcaaagaccgcctcaataagatcatggacaagctgctcgacaaggagattcatatg
atcaaccgaaggtcacagtcaaacagtggaggcggtggtggtggaggtagcagtttctcc
aaccacaaccacaacaacaactacatgctcaatgaggtggcaaacacgctgaccaaactt
ccgtcgacgcagtaccacagcggaggagaggtgctgtcttcgcacagcagtccatcgaga
agtgttcagcagtgtccgaactatcaggcactagagaccaatgcacttgctgctgctgct
tccacatcagaggctgctcaacaacaacaacaacagcagcaagcaacagcttctacttct
accagcaactgggacgagggaatcaaaagttgggatgccaagtttagacgtctgagtctg
aatgaaggaagcaccgcctctacatctcagccggtgaatgtggtcagctcagcagtgaat
ggcagctcaaaagtggcgcccaacactgaccattcgtcaacagctgcaaccggcactgcg
accagctccagcgtggacagcagcagtcctccggagacggccagttcggacaactctcct
acagtgagtcgacgaagtctcttccaggcatcgtcatcctctaagcaacaacagtcggcc
agcgacagcagcagcagtggtgagagcagtgactccttcagctccagctcctctacggag
aagaagtgctcacctattcatcgatcaaacctggtcgctggatcttcgagctcctccaca
cctcaccaccacctgtcaccgcatcacagcatcagcagcagcagtgttggtagtggactt
ctccagggagccgcgtccacttcagcggagatgacctacagtgaccaccacctctctggg
acgcctcctactatcgttgacttgaccaatggtcagtcgagagggtccacctttgagtcc
tttaacgccgcgtacatggctcctaatggctggaatggtactcctgccgcgacggtgacc
aactctccggcgccgacggcgaattcctgtggaaacagctactctcgacagagcatgtcc
actggaagtttggtgggtggggcaatgccaaagaacaacaacaacagcggcagcacctac
ctccagggaagcagtcacatcagccacctgaagccgcacatgcggtacaagggcaagcga
ggacactatccgatcataccgaaccagccctcggaagcgtcggctcactttatgttcgaa
ctggcgaagacggtgctcgccaaagccggcggcaacaacacctcggtcctcttcacgcag
ccgccctctagcagcaacggccgtgctcaccgcaaccttcacatgtgcgcctttcagatt
ggcctctacgcgctggggctgcacaatgccgtctcgcccaactggctctcccgcacctac
agcagccaggtgtcgtggatcacggcgcaggcaatggagattggccaccaggccattgcc
tttctcattgacacctgggagggacactttacgcccaatgaggtggcctcactcgccgac
cgggcctcccggggccaggagcagtcgatggtgagcgccgcggcgcagctggcgctcagc
tgtctgccgcactcgcacgccctcacgcccagtgaaattcaacgcgccctcattcagtgc
aaggagcagtcgacggagatgctggagcgggcgtgtctggccgtggagtcggccgctcag
ggtggcggagtcaaccctgatgttctctttcacgtcgcccacaagtggcatgagctgtac
gaccaggaggccatcaaggcgagacatcagggcagatttgagggcggaccaatgtcgggc
ggggctgccgtgccctaccttaccggcggacaccttcatcacggcggagcgcaccacaat
gggggaatggtgcaccatccatcggtgacggtgcacgcagtgccggctccgacgagcact
agctccttcagtcactgcaacctgacaccacgacagctcagctacctgcactcggtgtac
cgggtgggcatgctggcgatggagacgctggccagacgggtcaatgacgatcgaccgcag
acgaagtacgcaaagaatccaacgtactgcgaggacgtcaagtggctgctggtggtggca
aagaagttgggcacttcatttgtgcaagacttttgtgcctactccgccaatgccattgga
agtccttttgttctgctggagattatcaatgaggtgtatgcttcatttgagcattcgact
cagtctggaccgaatggctctagttctctgcagccgtacatggcgtctatccgctcgcat
atgctgaatcagctcatccaaaagtgtcgacagcttcacagttcgggctacgaccccggc
tactataagggcaatcgaccctacggcgggggaagctatggcagctatgacccttcctac
cactcgccacagcagcagcagcagtacagtagtggttatgactacgtcccaccgccgcca
ccaccaccgtcgtacagtcagtcgtacactccgtatcgaaagtactacaaacagtacctt
cccgggccgcagttctgcccagagacggggcggacagtgtgcagcaaggtggcacccttc
taccctatcgacgaggtcttctcggtggtgaagatggcccgtgcaaagcgcttcaacatt
agcagtgagtttgtcgatgaaagtgaaaacgatccagagccgaacctgtccgaggagcct
tggccagagccggagccctttctgcagcactccctgggaggacactcttttggtggtggt
ttcaacgttccgcaacagcccattgcgcacttccacaactttgactacaaaccgtactac
ggcgaaaagtaccgcgccaccgttccgccgtatcaccaccagcagcgatccatctacgcg
aatagctactcgggtccgcatgagcttggggcgtatgcctccgcctctgcagtggccgtc
tcgcacagtcggtacaagcgacaggcaggaggaagggccaccgagttgcccattgagcca
gtctgccccagtcgaatgatactgatcgagccaaaagcggctcttaacgacaaacgccag
tggaagtttgtggtcaatctaagcgagagagatcctcgattgaagcaggctattaaagtt
gaggtttgcac
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integrated database retrieval system
