Rhagoletis zephyria (snowberry fruit fly): 108374359
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Entry
108374359 CDS
T08513
Name
(RefSeq) protein Tob1 isoform X1
KO
K14443
protein Tob/BTG
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108374359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108374359
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108374359
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108374359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BTG
Motif
Other DBs
NCBI-GeneID:
108374359
NCBI-ProteinID:
XP_017485838
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MHIEIQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFQGHWYPEKPFKGSAFRCLKT
GDPIDSVLERAARESGVPIADILENLPAELSVWVDPGEVSYRIGEKGAVKILYSENSDNH
EDNTSADREVNKTFNPEAQCFRPIDAVNTSMNSLSLSPKTSPHAGSSPHSASSNSPTYKG
SPNPAVAANGSFMQRTQAPLTFTTATFAQTKFGSTKLKTSSKRTNSSSSYRMSPTEFSNY
IKQRAMQQQQQLHHGGHGGQNVAQPPNHFGPIGPVSPARSLSPNPLSLGLGQNGATADPF
YFPNMASMGMYPQFNGHRNVFDAHFHAAENNGLYAGNAGGAANNPPNGGHGKFNNYLDPH
GFYGVGGGNQHLQQSAAAAAAAAAAAAAAAAAHQQQQQHQQSSLAPPPGVIGSALAAQQQ
HQQQQANGKAKNGLDKNAVDSANGGNNNNNNSNNGITVTVTNGVSAEATNKATNNAAKSA
VAAAASSAVSPSPLAAAAAAAVAASAAAAAAANSNNQQQQQQDSNNSKLIDGLNSFYSNA
AGPYQQLLVAN
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcatatagaaattcaagtggcattaaatttcgtgatttcgtatttgtataataaactg
ccaaggcgacgtgtgaatattttcggagaggaactcgaaaaggcattgaaggataagttc
caaggtcattggtacccagagaagccattcaagggttccgcatttcgttgtttaaaaact
ggtgacccgattgactcggttttggagcgcgcagcccgtgagagtggcgtaccaattgct
gatattttagaaaatttgccagctgagctctcggtatgggtggatcctggtgaggtgtca
tatcgtattggcgaaaagggtgctgtgaagattctctactcggaaaatagcgacaatcat
gaagacaacacatcggccgatcgcgaggtcaataagacttttaaccctgaagcgcaatgc
ttccggcccatcgatgcggttaatacgagcatgaatagtttgagcctgagtccgaagaca
tctccgcatgcgggttcttcaccgcattcggcttcctccaattcgcccacctacaagggc
agtcccaatcctgctgtggcggccaatggctcatttatgcagcgtacacaagcgccacta
acattcaccacagccacctttgcgcagacgaaattcggcagcaccaaattgaaaaccagt
tccaaacgtaccaatagcagcagttcgtatcgcatgtcgcccacagaattctccaattac
attaaacaacgtgccatgcaacaacaacagcaactacatcacggcggccatggtggacag
aatgtagcgcagccaccgaatcacttcggtcccatcggacccgtctccccagcacgctca
ctctcaccgaatccactctcgctgggcttgggacagaatggtgccaccgccgatcccttc
tacttccccaacatggcctcaatgggcatgtatccacaattcaatggacatcgaaatgtc
ttcgacgcgcatttccatgctgccgaaaataatgggctgtatgctggtaacgctggcggc
gccgccaacaacccacccaacggcggtcatggcaaattcaacaactacttagatccacat
ggcttctacggagtgggcggcggtaatcagcatttgcaacaatcagctgcagccgctgcc
gccgccgctgctgctgctgcagctgccgcagcagctcatcagcagcaacaacagcatcaa
caatcgtcattggcgccaccgccaggcgttattggttctgcattggcagcgcagcagcag
catcaacaacaacaagcaaatggcaaagccaaaaatggccttgataagaacgcagttgac
agcgccaatggcggcaacaacaacaacaacaacagcaataatggcattaccgtaactgtt
acgaatggcgtcagcgccgaagcaacaaacaaagccaccaacaatgcagccaagagcgct
gtcgccgctgcagcatcctctgcagttagtccgtcgccattagctgcagcagctgctgct
gccgtagcagccagcgctgccgccgccgcagctgccaatagcaataaccaacagcaacaa
caacaagactcaaacaactcgaaacttatcgatggtctcaattcgttctattccaatgca
gctggaccctaccagcagttgctggtggccaattaa
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