Rhagoletis zephyria (snowberry fruit fly): 108374391
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Entry
108374391 CDS
T08513
Name
(RefSeq) LOW QUALITY PROTEIN: T-related protein-like
KO
K10172
brachyury protein
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rze03000
]
108374391
Transcription factors [BR:
rze03000
]
Eukaryotic type
Other transcription factors
T-box
108374391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T-box
DUF4429
Motif
Other DBs
NCBI-GeneID:
108374391
NCBI-ProteinID:
XP_017485862
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MTTSHILSAVDPAGMSGTTSNNNNTNNHNNNNLTNVNGDNTSSVGLSHHSATNNNNGSHS
SSAHSPHAQHTHHSVATGGSGISGGGGGLIHGMGSSINHLGAPLATNRSPGMERNLHVSL
DDRELWLRFQNLTNEMIVTKNGRRMFPVVKISTSGLDPAAMYTVLLEFVQVDSHRWKYVN
GEWVPGGKAEVPPANPXYVHPESPNFGXHWMKEPISFAKVKLTNKTNGNGQIMLNSLHKY
EPRVHLVRVGSEQRHVVTYTFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKERPDT
LYSHEAPYGWLIPPPTHYTSVAQAPPPPPPSLAVSNSPLGMGCDRYGRTLSSRSMSAHSA
RASPYARPRLTPTTPGSSSPGPGNSGVMNGSTGSASPPQQPPSAPHTPTSLQSAHTTNLG
VSGSNVGMTSSANPVGSFSGFSSSYTQSSFMPVEPSSSMFSYAGGWQGNGGYWSSPAAVS
AVPPTAVPVNVNQSSNSGSGSGAGRAISAHNSPSPTNGGSPNYTSPSPGYTIHHLTPHPS
HQYNVAQSAAAAAAHAADMYQTSTPTQSYGAPPTHQVYHPTPTSPSHQLYTNVXLNAPTA
LSYAGTSWHNGGGAEYGLYQNAAYGYQPEYIPLVSDLGYYLTSA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaccacctcgcacattttgtccgccgtcgatccggctggcatgagtggcacaacatcg
aataacaacaacaccaacaaccacaacaacaacaatttgacgaatgtaaatggtgacaat
accagtagcgttggcctatcacaccacagcgccaccaacaacaacaatggcagccattcg
tcgagcgcacattcaccacacgcacagcacacacatcacagcgtcgctacgggtggcagc
ggtattagcggcggcggcggcggtcttattcatggcatgggcagcagcataaatcatctt
ggggcgccgttggcgacaaatcgcagccccggcatggagcgaaatctgcacgtcagcctg
gatgaccgtgaattatggctacgctttcagaatcttaccaacgaaatgatcgtcacgaag
aatggcagacgcatgtttccagtggttaagattagcacttccggtctggacccagccgcc
atgtatacagtactgctggagttcgtgcaggtggattcacatcgttggaagtacgttaac
ggcgagtgggtgcccggtggcaaggcggaagtacctcctgcgaaccctntttacgtgcac
ccggaatcaccgaacttcgggncacactggatgaaggagccgatttcttttgcgaaggtg
aaactgaccaacaagacgaacggcaatggccagattatgctgaactcgctgcacaagtac
gagccgcgcgtgcatttggtgcgtgtgggttcagagcagcgccatgtggttacctataca
tttccagagacccaattcattgctgtaacggcctatcaaaacgaggaggtcacatcgtta
aagatcaaatacaatccatttgcgaaagcctttctggatgcaaaggagcgtcccgatacg
ctgtattctcatgaggcaccctacggatggctaataccaccgccgacccattacaccagc
gttgcacaagcgcctccaccaccgccaccaagcttggcggtatcgaattctcccctaggc
atgggttgtgaccgctatggacgtacgctcagcagtcgcagcatgtctgcacatagtgca
cgcgcttcaccttatgcacgaccgcgtttgactccaaccactcctgggtcgagctctcca
ggacctggtaattctggcgtgatgaacggcagcactggcagcgcttcgccaccgcagcag
ccaccttcagcgccacacactccgacaagcctacaatccgcacataccacaaacttgggc
gttagcggcagcaatgtaggcatgaccagctccgcaaatccagttggctccttttcaggg
ttttccagttcctatacacagtccagcttcatgccggtggagccgagttcatcgatgttc
tcatacgcgggtggctggcaaggcaacggcggttattggagttcgccggcagcagttagt
gccgttccgccgacagcagtgccggtgaatgtaaaccaaagcagcaacagcggcagcgga
agcggcgctggtcgtgcgatttctgcacacaactctccatcgccgacaaatggtggatcg
ccgaattacaccagtccatcgccaggctataccattcaccacctcacaccacacccgtcg
catcaatacaatgtcgcacagtcagcggcggcagcagcggcacatgcagctgatatgtat
cagaccagcacgcccacacagtcctatggtgcaccaccaacgcaccaagtttaccaccca
acgcccacctcgccctcgcaccagttgtacacgaacgtanntttgaacgcgcccacggcg
ctgagctacgcgggcacctcgtggcacaatggcggcggcgctgagtatggattgtatcag
aacgcagcatatggatatcagccggagtacataccgctggtatcggatttgggttactac
ctcacatccgcttga
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