Rhagoletis zephyria (snowberry fruit fly): 108374424
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Entry
108374424 CDS
T08513
Name
(RefSeq) histone-binding protein RBBP4-like
KO
K10752
histone-binding protein RBBP4
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03082
ATP-dependent chromatin remodeling
rze03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108374424
03083 Polycomb repressive complex
108374424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rze03036
]
108374424
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
108374424
Histone modification proteins
HAT complexes
HATB complex
108374424
HDAC complexes
Sin3A-HDAC complex
108374424
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
108374424
PRC2.2
108374424
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
108374424
Heterochromatin formation proteins
Other heterochromatin formation proteins
108374424
Chromatin remodeling factors
NuRD complex
108374424
NuRF complex
108374424
NuRF complex (fruit fly)
108374424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
eIF2A
Beta-prop_HPS5
MIOS_WD40
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
108374424
NCBI-ProteinID:
XP_017485896
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MSNTVEAVQQQQQTQGGGGGQQGQTAASKNEAAQEERAINDEYKIWKKNTPFLYDLVMTH
ALEWPSLTAQWLPEVQRPQAEFALHRIILGTHTSDEQNHLVVATVQLPNDDYPFDGSYYD
IDNGEYGGFASVSGKIEIIQKINHEGEVNRARYMPQNPNVIATKTPSSDVLIFDYTKHPV
KPVDKVCTPDLRLRGHQKEGYGLSWNANLNGHLLSASDDMTICLWDINGTQRPERVIEAS
SVFTGHTAVVEDVAWHLLHESIFGSVADDQKLMIWDTRSRDTSHPSQVVEAHGAEVNCLS
FNPFSEYILATGSADKTVALWDLRNLKVKLHTFNSHKDEIFQVQWSPHNETILASSGTDR
RLNIWDLSKIGEDQTSEDAEDGPPELLFIHGGHTAKISDFAWNPNDPWVICSVSEDNIMQ
CWQMAENIYTEEEVESAPNDIE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaccgtggaagcagtgcaacagcagcagcagacccaggggggcggaggagga
cagcagggccagactgcggccagcaagaatgaagccgcccaggaggagcgagccatcaac
gacgagtacaagatctggaagaagaacacccccttcctctacgacctggtgatgacccac
gcgctggagtggccctcgctgaccgcgcagtggctgcccgaggtgcagcggccgcaggcg
gagttcgccctgcaccgcatcatcctcggcacgcacacctccgacgagcagaaccacctc
gtggtggccacggtgcagctgcccaacgacgactaccccttcgacggcagctactacgac
attgacaatggcgagtacggcggatttgcttcagtgtccggcaaaatcgaaatcatccag
aagatcaatcacgagggcgaggtgaaccgggcgcgctacatgccccagaaccccaacgtc
atcgccacgaagacgccctccagtgacgtgctcatcttcgactacaccaagcacccggtg
aagccggtggacaaagtctgcacgcccgacctgcgcctccgcggccaccagaaggagggc
tacgggctgtcgtggaacgccaacctgaacgggcacctcctctctgcctccgacgacatg
accatctgcctgtgggacatcaacggcacccagcggccggagcgggtgatcgaggcgagc
agcgtcttcaccggccacaccgccgtcgtcgaggacgtcgcctggcacctgctgcacgag
tccatcttcggctcggtggccgacgaccagaagctgatgatctgggacacgcgcagccgc
gacaccagccaccccagccaggtggtggaggcgcacggcgccgaggtgaactgcctctcc
ttcaaccccttcagcgagtacatcctggcgaccggctccgccgacaagaccgtcgccctc
tgggacctgcgcaacctgaaggtgaagctgcacaccttcaactcccacaaggacgagatc
ttccaggtgcagtggtcgccccacaatgagaccatcctcgcctccagcggcaccgaccgc
cgcctgaacatctgggacctgagcaagatcggcgaggaccagacgtcggaggacgcggag
gacggcccgccggagctgctcttcatccacggcggccacaccgccaagatcagcgacttt
gcctggaaccccaacgacccctgggtgatctgctccgtctccgaggacaacatcatgcag
tgctggcagatggctgagaacatctacaccgaggaggaggtcgagtcggcgcccaacgac
atcgagtag
DBGET
integrated database retrieval system
