Rhagoletis zephyria (snowberry fruit fly): 108374687
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Entry
108374687 CDS
T08513
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04140
Autophagy - animal
rze04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108374687
04148 Efferocytosis
108374687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108374687
Membrane trafficking [BR:
rze04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
108374687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Vps16_N
DUF327
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
108374687
NCBI-ProteinID:
XP_017486176
LinkDB
All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MHQAYNIHTILKQGVQIESIAAYDNNVILGTRSGQLIMYSVDSNGTVDMLMFNKNFSKKS
IVQMEVIPAENLLFVLTDNTVHVCDISGVGNNFTLIHSAMVTKGCTLFALDVKPTKLPTG
EMTTVIGVCCAIKRQLQFFYWKQDKLNTFDFNIELKDVPKAICWVDDAVCIGFKDEYVIY
NMLASKPEKHDLIVTSSSHSMDPCICLIKHNMLGVSKDEYLVAIDPSVYVKKNDEKLKTY
GTIEAAVGNVEIKNKPKPMMWSSALLDIVWDEPYVIGRVANAIEVRCIEGSSLNKDTLVQ
TIPELSKTKLLVRSGKGTLFAAANSELWCIRMVDIPTQRQILLQQKKFQLAIGLTNISEE
PEDIKAATIREIHVRYARELFANKQFADSMKEFEKAAADPYDVIRLFPNLLQDQASKSNE
ASVPAPLMPQLEEKDMENALLALIEFLALARQKEVVKLRDTKSTSKSLLSIIDTTLLKCY
LQTNDSLVAPLLRLNQCHLEESEKTLKKHDKISELIILYQMNGKHKKALELLKAQASVEG
SSLYGHDRTIKYLQQLGSPQLPLIFEFCDWVLKEAPDDGLRIFTDNFIEVENLPRANVLD
FLLSRHKALVIPYLEHVINVWKDNNTLLHNVLAKQYREKVHSLLEEVKQEEPTKQSESQE
NLRKYRENLCEFLKNSQNYSPEVVLRDFPTNDLLEERALILGRLKKHEEVLSIYVQVLGD
VEKAAEYCEANYEDDKNIFATLLMTLLNPSRQPPYEDVALHPDFLRPNEEIILGLLNKYA
EKIDPYVVIPLLPDDMPVHSIWNYLEIVLRTEIAERHENETMARLLKAEIRRVREEIRAE
ENKSVVLTEFTVCPQCKKRFTNPPAFVRYPNGEVVHLSCHDKLVQSSSGNSS
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaggcttataatattcacacaattttaaaacaaggagtacaaatagaatccatt
gccgcctatgataacaatgtcatcctgggcacccgcagtggtcagcttatcatgtactca
gtggacagcaatggaactgtagacatgttaatgtttaataaaaactttagcaaaaaatct
attgtacagatggaggtcataccggctgagaatttgctatttgtgctgactgacaatacg
gtgcatgtttgcgatatttctggcgtgggtaataattttacattgatacacagtgctatg
gtcacaaaaggttgcactttatttgctttggatgtaaagcctaccaaattaccgactggc
gagatgactaccgttattggtgtatgttgtgcaattaaacgccagttacaattcttttac
tggaaacaagataaactaaatacttttgatttcaatatcgaattgaaggatgtgccaaag
gcgatctgttgggtagatgatgcggtttgtattggattcaaggatgagtacgtcatttac
aatatgttggcgagtaagcctgagaagcacgatttgattgttacttcatcgtcacatagc
atggatccttgcatttgtcttataaaacataatatgctgggcgtgtccaaggacgaatat
ctagttgccattgatccaagtgtttatgtgaagaaaaatgacgaaaaactcaagacatac
ggcacaattgaggcagcagttggaaatgttgaaatcaaaaataagccaaaaccaatgatg
tggagcagcgcattgctcgatatagtttgggacgagccctatgtaatcggtcgcgttgca
aatgccatagaagtgcggtgcattgaaggcagcagtttaaataaggacacacttgtgcaa
accatacctgagctcagtaaaactaagttgttagtgcgctcaggaaaaggcacactattc
gctgcagcaaattcagaattatggtgtattcgtatggtagacatacccacgcagcggcag
attttactgcagcagaagaaatttcaactggccatagggttgacgaatatctccgaggag
ccggaggacatcaaagcagctacgattcgcgaaatacatgtgcgttatgcgcgtgaattg
tttgctaataagcaatttgccgattctatgaaagagttcgaaaaagcggctgccgaccct
tacgatgttatacggctttttccaaacttgctgcaggatcaggcaagcaaatctaatgaa
gcatctgtgcccgccccactaatgcctcagttggaggaaaaagatatggaaaatgcgctc
cttgcattgatagagtttttggcattggcacgtcaaaaagaggtagtaaaacttcgtgat
acaaaaagtacctcaaaatcgctgctttcaattatcgatacaacactattaaaatgttat
ctgcagactaatgactccttggttgcgccactactgcgtttaaatcaatgccatttagag
gaatcggaaaagacattgaagaaacatgataaaatttccgagttgatcatactatatcaa
atgaatggcaaacataagaaagctttagaactgctgaaggcgcaggcttcagtcgaaggt
tcgagcctttatggacatgatcgtactataaaatatttacaacaattaggcagtccgcaa
ttgccgctaattttcgaattctgcgattgggttttaaaagaagcgcctgatgatggctta
cgtatttttacagataattttatagaggtagaaaacttgcctcgagccaatgtactcgat
ttcctgctaagtcgtcacaaagccttagtcattccatatttggaacatgtaatcaatgtc
tggaaggacaacaataccctcctacacaacgtattagctaaacaatatcgcgaaaaggtg
catagcctactcgaagaggttaaacaagaggaacccacgaagcaaagtgaatcgcaagag
aatttgcgtaaataccgagaaaacctgtgtgaattccttaagaactcacagaactattca
ccagaggtggtgctaagagattttcccacaaatgacctgcttgaagagcgtgccttgatt
ctcggtcgtctaaagaagcacgaagaggttctgtcaatctacgtgcaagtgttaggtgat
gtggaaaaagcagctgagtattgtgaagcaaattatgaagatgataaaaatatttttgca
actctattgatgacgctattgaatccatctcgccagccgccatatgaggacgttgcgcta
catcccgactttttacgaccgaatgaagaaatcatactagggctcctaaacaaatatgcg
gaaaaaattgacccctatgtcgtgataccgttgctgcccgatgacatgccggtgcattct
atatggaactacctggaaatagttttgcgtaccgaaatcgcggagcgacatgaaaacgaa
acaatggccaggctgcttaaggccgaaattcggcgtgtccgagaagagattcgtgccgag
gaaaataaatcggttgttctcactgagttcacggtatgtccacaatgtaagaagcgtttc
acaaatccaccagctttcgtgcgttatcccaacggagaagtggtacatttatcttgtcat
gacaaacttgtacaatcgagctcgggaaatagtagttaa
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