Rhagoletis zephyria (snowberry fruit fly): 108374870
Help
Entry
108374870 CDS
T08513
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108374870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rze03009
]
108374870
Ribosome biogenesis [BR:
rze03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108374870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_BBS7
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_IFT140_1st
LT-IIB
WDR90_beta-prop_4th
CFAP43_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
108374870
NCBI-ProteinID:
XP_017486394
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MNSKKVEVGSTRTHNVRFYNLSPRSIQSMAYNKLFHKLAITRNDGSIEIWDMQYSAYLEK
VIPKSPGNSVEGMAWAGERFFSVGLTGELVEWDLHLLKPRRKQFVTGNAIWCIDINSTGT
ELVVGTEEGYINIFEIDNDQMQYKNLFDKQEGRVLCCKFDRTGEFLVTGSLGAIRIWDVK
SGHALHKMTVARAERKKEVIVWSLQVLSDFTIVSGDSRGQVTVWDGKMATQLESHQVLKA
DVLTVAINEEENMLMCSGIEPIIRIYAKTKIKREDTEYNCWVKYLQRSVHDNDVKALICA
GDRIYSGGMDGYLGISSASKRVSTIAKYGPFLKNPCVVVSPNNRLLLLRYTNYLEIWRLG
STDGRPQFEGSADDEQDNKPKHKNKAPERRLFALNSAPEKLLEFKSTHEEPIVCATISPD
SQWLCYSTQKHIRLFRFVPAVAGKNDTQLARIKGLPEQFTIASHLTFTSDSRRLFLVQPN
THQIHVFSVVNNGSTDLDFVESIETSKHIKDVINLLAVSECGTYVVATGTDHTIGVWRIF
QGKHYKHHLNMPRYSAITTALAIHAKEPRLVAAFSDGKIIEYDLEEMCFTCSEQEYFVDN
AETHCVSNVLVDKRNPNHIILHNDAYLYVLEKTTSKEGENGQDEDAGETPKKKAGKKFKR
VNSDNKVSGLRLKFKKSFEHLISLWWLSTDELVAVGVNPITLIEQLPDVFKQKKFGTS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtaaaaaagttgaagttgggagtactagaactcataatgtccgtttttacaat
ctctcgccgcgctccatacaaagcatggcttataataagctctttcacaaactagctatt
acgcgaaatgatggctctatcgaaatatgggatatgcaatattccgcctatttggaaaaa
gttatacccaagtctcctgggaactccgttgagggcatggcatgggctggtgagcgtttc
ttttccgtcggtcttactggcgaattggttgaatgggacttgcatttgctcaaaccaagg
cgcaagcaatttgtcacaggcaatgccatttggtgcattgatataaactcaactggcaca
gaattggttgtcggcactgaagaaggatatatcaatatatttgaaatagacaatgatcag
atgcagtataagaacctatttgataagcaagagggacgcgtattatgctgcaaatttgac
cgtacaggggaattcctcgtgacaggctccttaggtgctatacgaatatgggatgttaag
agtggtcatgcgctgcataaaatgactgttgcacgggcggaaagaaagaaggaggtgata
gtgtggtcacttcaagtgctaagtgatttcactatcgtttcgggcgattctcgtggacag
gtaacagtatgggatggcaaaatggcgacacagctagaatcacatcaagtgcttaaagcg
gatgtgctaacggttgctataaatgaagaagagaatatgttaatgtgctcaggaatcgag
ccaattatcagaatctatgctaaaacaaaaatcaagcgtgaagacacggaatacaattgt
tgggttaaatatctgcaacgtagtgtgcacgacaacgatgtgaaggcattgatatgtgct
ggtgatcgtatatattccggcggtatggacggatatttaggtatatcttcagccagcaaa
cgtgtctctacaatagctaaatatggtccattcttaaaaaacccgtgtgttgttgtatca
cccaacaaccgtctattactacttcgttatacaaactatttagagatatggcgtctgggc
tctacagatgggagaccacaatttgagggatctgccgatgatgagcaggataacaaacca
aagcacaaaaataaagcaccagagcgtagactatttgccttgaattcagcgcctgaaaaa
ttgttagaattcaaaagcacacatgaggagccgatagtttgcgcgacaatttcacccgac
agtcagtggttgtgctattcaacacaaaagcatatacgactattccgtttcgtgccagcc
gtggccggcaaaaatgatacccaacttgcgcgcattaaagggctgcccgaacagtttacc
attgcctcccatctaacatttactagcgactctaggcgcctattcctcgtgcaacccaat
acccatcaaatacatgtattttctgtggtcaacaatggtagtactgacttagattttgta
gaaagtattgaaaccagcaaacacataaaggacgttattaatctattggctgtgtcagag
tgcggtacatacgtagtagcgacaggtactgatcatactattggtgtgtggcgcatattc
caagggaaacactacaaacaccatctcaatatgccacgctactcggctattaccactgcg
ttggcgatacatgcgaaagaaccacgtcttgttgcagcattttccgatggtaaaattatt
gaatatgacttggaagaaatgtgcttcacctgttcggagcaggaatatttcgtggataac
gcagaaacgcattgtgtctcaaatgtgttagtagataagcgcaatcccaaccacattata
ctacacaatgatgcgtatttatatgtgttggaaaaaacgacaagtaaggaaggagagaac
gggcaagatgaggatgccggagaaacaccgaaaaagaaggctgggaaaaagttcaagcgt
gtaaatagtgacaacaaagtcagtggtctgcgtttaaagttcaagaaatccttcgagcat
ttaatatcactctggtggcttagcacggacgagctagttgcagttggtgtgaaccctatc
acgttgatagaacaactgccggacgtattcaaacaaaagaaattcggcacatcttaa
DBGET
integrated database retrieval system
