Rhagoletis zephyria (snowberry fruit fly): 108374904
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Entry
108374904 CDS
T08513
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108374904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rze03000
]
108374904
03021 Transcription machinery [BR:
rze03021
]
108374904
Transcription factors [BR:
rze03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
108374904
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108374904
RNA polymerase III system
TFIIIB
108374904
RNA polymerase I system
SL1/TIF-1B
108374904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
SOG2
Rrn6_HB
Motif
Other DBs
NCBI-GeneID:
108374904
NCBI-ProteinID:
XP_017486437
LinkDB
All DBs
Position
Unknown
AA seq
326 aa
AA seq
DB search
MDQMLSPGFSIPSIGATPLHQMDADQQIVPNPVYHPAADTHDLNHMGMPSLLNSGNSPST
ASNSNMGGGTHPTLPTAHKQMQSYQSSSSLMTNGGAPQSLMQPQTPQSLMSPMVPMSERA
DNLSNIHQTMGPATPMTPMTPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYN
PKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEDDSRLAARKYARIIQKLGFQAKFRDF
KIQNMVGSCDVKFPIRLEGLVLTHCNFSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLT
GAKVRQEIYEAFDKIFPILKKFKKQS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaatgttgagtcccggtttctcgattcctagtattggagcaactccactccat
caaatggatgcagaccaacagattgtgcccaatcctgtttatcatccagcagcggacaca
catgacttgaatcatatgggtatgccgtcgttactaaatagcggtaattcaccatcaaca
gctagcaactctaatatgggcgggggtacacatccgacattgccgacagcgcataaacaa
atgcaatcctaccaaagttccagctcattgatgacaaatggaggcgcgccacaaagtctt
atgcaaccacaaacgccacaaagtttaatgtcaccaatggttcccatgagtgaacgcgcc
gataaccttagtaatatacatcaaactatgggtcccgcaacacccatgacaccaatgact
ccaggttccgctgatcctggtattgtaccacaactacagaacatagtttcaacagtaaac
ctttgttgcaaactagatttaaaaaaaatcgctcttcatgcgagaaatgccgagtataat
cctaaacgttttgctgcagtaattatgcggatacgagaacctagaactacagcactgata
ttttcctctggcaagatggtatgcaccggtgcaaaaagtgaggacgactctcgactagca
gcacggaaatatgcgcgaatcattcaaaagctaggatttcaggcgaaatttcgtgatttt
aaaatccaaaatatggttggatcatgcgacgtgaagttcccaatacgattggaaggtcta
gtacttacacattgcaatttcagttcttatgaacctgagctatttcctggtcttatttat
cgtatggtgcggcctcgtattgtgctcctgatatttgtgtctggtaaggtggtgctgaca
ggagcaaaggtgcgccaagaaatatatgaagctttcgataaaatatttcctattctaaag
aaatttaaaaaacaatcttaa
DBGET
integrated database retrieval system
