Rhagoletis zephyria (snowberry fruit fly): 108375073
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Entry
108375073 CDS
T08513
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108375073
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
108375073
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
108375073
NCBI-ProteinID:
XP_017486645
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MPPTIISTTVNADKRPLRPAERKSELICRVKYGNSLPDIPFDLKFLQYPFDSNRFVQYNP
TSLERNYKYEVLTEHDLGVTIDLINRDLYQADPYAQLDPADERLLEEDVHTPHDSMRSRQ
HSRSVSWLRKSEYISTEQTRFQPQNLENIEAKVGYNVKKSLREETLYLDRDAQVKAIEKT
FNDSKQEITKHYSKPNVVPVEVLSVYPDFKNWKYPCAQVIFDSDPAPAGKNVPAQLEEMS
QAMIRGVMDESGEQFVAYFLPTEETLDKRRNDFTENILYKDDEDYEYKIAREYNWNVKSK
ASKGYEENYFFVVRQDGVFYNELETRVRLNKRRVKAGQQPSNTKLVVKHRPLDSNEHRMQ
RYRERQLEPPGDEEEEEMEEEEEEEEQITTQATNDNETNKDTQGGEGEESEIDNAEAAQK
AKDRQSRSRSKSHAKSRSVSGSRSGSGSRSGSGSRASHSRSRSRSKSGSRSRSGSRSTAH
SHSRSRSASKSPSRSRSATPAGSHKSASHSRSASRSQSRSASRSRSPSGSRSRSASQSHS
PSKTPARSRSRSHSGTRSRSRSASGSRSGSASRTPSRSGSATPSGSGSGSGSESEAEQ
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaactatcattagtacgacggtaaatgccgacaagcggccgcttcgcccggct
gaacgcaaatccgaattaatttgccgcgtcaaatacggcaatagtttgcccgacatccct
tttgacttgaaatttctgcagtatccgtttgacagtaatcgctttgtgcaatataatccc
acttccctggagcgcaactataaatatgaagtgctcactgaacatgacttaggtgttaca
attgacttaattaatcgcgatctttatcaagccgatccatatgctcaacttgacccagcc
gacgaaagactactggaggaagatgtgcacacgccacatgattcgatgcgttctcgccag
cattcgcgtagtgtttcgtggttgcgtaaatcagaatatatttcgactgaacagacgcgc
ttccaaccgcaaaatcttgaaaatatagaagctaaggttggttacaatgttaagaagtct
ctacgtgaggagaccttgtacctagatcgtgatgcacaagttaaggctatcgagaaaaca
ttcaacgattctaagcaagaaatcaccaagcactactccaaaccgaatgtggtacccgtc
gaagtactgtctgtgtatccagatttcaagaattggaagtatccatgtgcccaggttatt
ttcgacagcgatccggcacctgctggcaagaatgtaccagcacaattagaggagatgtca
caagccatgattcgtggtgtgatggacgaaagtggcgagcaattcgttgcctatttccta
cccacagaggagactttagacaagcgacgtaatgattttaccgaaaatatactgtacaag
gatgatgaagattacgagtacaaaattgcacgtgaatataactggaatgttaaaagtaaa
gcgtctaagggttacgaagaaaattacttcttcgttgtacgtcaagatggtgtattctac
aatgagctggagacacgtgtgcgtctcaataagcgccgtgtgaaagcaggacaacagcca
agcaacaccaaattagtggtaaaacatcgtccacttgactccaatgagcatcgcatgcaa
cgttaccgtgagcgccaactggaaccacccggcgacgaggaagaggaagaaatggaagaa
gaagaggaagaggaggaacaaattactacgcaagcaacaaacgataatgagaccaataaa
gacactcagggcggtgaaggagaggaatcggaaattgataatgccgaagctgcacagaag
gccaaggatcgccagtcacgctcacgttctaaatcgcatgcgaaatctcgttctgtttca
gggtcacgatccggttctggctcacgttcaggttcaggttctcgcgcttcccattcgcgt
tcccgttcgcgatccaaatcaggcagtcgcagtcgtagtggctctcgttcgacagctcac
tcacattctcgatcacgttctgcatctaaatcaccatcacgatctcgttctgccactcca
gctggttcccataaatccgcttcacattctcgatcggcttcacgctcacaatcgcgttct
gcaagccgttcacgctcgccctctggctctcgttcccgttccgcctcgcaatcacattca
ccatcaaaaaccccagcacgttcgcgttcacgctcccactctggcacacgttcacgctct
cgcagcgcatctggatcacgctccggttcagcatcacgtactccatcacgttcaggcagt
gctaccccgagtggttccggcagcggctccggtagtgaatcagaagccgagcaataa
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